Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.220946	Araf1	v-raf murine sarcoma 3611 viral oncogene homolog 1	X	X A2-A3.1 (X 6.2 cM)	11836
Gene Ontology	ATP binding | cell growth and/or maintenance | diacylglycerol binding | intracellular signaling cascade | mitochondrion | protein amino acid phosphorylation | protein binding | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor signaling protein activity | regulation of cell cycle | signal transduction | transferase activity
Human Homolog	ARAF1[v-raf murine sarcoma 3611 viral oncogene homolog 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 15 In Situ Hybridization Images

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SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACTGTCTT CCGCCTGTGG GGATTGTGGG TAGATTTGGG TCATTATGAT 11.3 0.0113 Cb medulloblastoma CCGCCTGTGG TAGATTTGGG TCATTATGAT 23.1 0.0231 P8 GC+1d culture AGACTGTCTT CCGCCTGTGG TCATTATGAT 9.1 0.0091 P8 GC+SHH+1d culture AGACTGTCTT CCGCCTGTGG TAGATTTGGG TCATTATGAT 18.7 0.0187 3T3 fibroblasts AGACTGTCTT CCAAGGCACA 7 0.007 E15 cortex CCAAGGCACA CCGCCTGTGG 19.7 0.0197 P1 cortex CCGCCTGTGG TCATTATGAT 22.7 0.0227 Hypothalamus CCGCCTGTGG GGATTGTGGG TCATTATGAT 68.8 0.0688 E12.5 retina CCAAGGCACA GGATTGTGGG TAGATTTGGG 20.7 0.0207 E14.5 retina TCATTATGAT 9.1 0.0091 E16.5 retina AGACTGTCTT CCGCCTGTGG TAGATTTGGG TCATTATGAT 10.8 0.0108 E18.5 retina TAGATTTGGG TCATTATGAT 20 0.02 P0.5 retina CCAAGGCACA CCGCCTGTGG GGATTGTGGG TAGATTTGGG TCATTATGAT 17.8 0.0178 P2.5 retina AGACTGTCTT CCAAGGCACA TAGATTTGGG TCATTATGAT 23 0.023 P4.5 retina TAGATTTGGG TCATTATGAT 27.8 0.0278 P6.5 retina AGACTGTCTT CCAAGGCACA CCGCCTGTGG GGATTGTGGG TAGATTTGGG TCATTATGAT 40.1 0.0401 P10.5 crx- retina AGACTGTCTT CCGCCTGTGG GGATTGTGGG TAGATTTGGG TCATTATGAT 26 0.026 P10.5 crx+ retina CCGCCTGTGG GGATTGTGGG TAGATTTGGG TCATTATGAT 32.6 0.0326 Adult retinal AGACTGTCTT CCGCCTGTGG TAGATTTGGG TCATTATGAT 44.5 0.0445 ONL CCGCCTGTGG TAGATTTGGG TCATTATGAT 13.3 0.0133