Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2210	Abca2	ATP-binding cassette, sub-family A (ABC1), member 2	2	2 A2-B (2 12.6 cM)	11305
Gene Ontology	ATP binding | ATPase activity, coupled to transmembrane movement of substances | integral to membrane | integral to plasma membrane | membrane | transport | transporter activity
Human Homolog	ABCA2[ATP-binding cassette, sub-family A (ABC1), member 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGAGCAGGAC (5) 11.4 0.0114 P8 Cb GC CCAGGCCCTG (8) 3.3 0.0033 P8 Cb GC TCCTATGAGC (2) 3.3 0.0033 P8 Cb GC GCTTGAAGGG (2) 1.6 0.0016 P8 Cb GC TGGCTTCCTC (3) 1.6 0.0016 Cb medulloblastoma GGAGCAGGAC (5) 48.6 0.0486 Cb medulloblastoma TGGGTGGCAG (5) 2.3 0.0023 P8 GC+1d culture GGAGCAGGAC (5) 10.3 0.0103 P8 GC+1d culture TCCTATGAGC (2) 1.1 0.0011 P8 GC+1d culture TGGCTTCCTC (3) 1.1 0.0011 P8 GC+SHH+1d culture GGAGCAGGAC (5) 5.9 0.0059 P8 GC+SHH+1d culture GCTTGAAGGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGTGATGA (2) 1.2 0.0012 3T3 fibroblasts GCTTGAAGGG (2) 17.5 0.0175 3T3 fibroblasts CCAGGCCCTG (8) 3.5 0.0035 3T3 fibroblasts GTGGTGATGA (2) 3.5 0.0035 3T3 fibroblasts TGGCTTCCTC (3) 3.5 0.0035 E15 cortex GGAGCAGGAC (5) 9.9 0.0099 E15 cortex GCTTGAAGGG (2) 4.9 0.0049 P1 cortex GGAGCAGGAC (5) 4.5 0.0045 P1 cortex GTGGTGATGA (2) 4.5 0.0045 Hypothalamus GGAGCAGGAC (5) 34.4 0.0344 Hypothalamus TGGGTGGCAG (5) 3.6 0.0036 Hypothalamus CCAGGCCCTG (8) 1.8 0.0018 Hypothalamus GCTTGAAGGG (2) 1.8 0.0018 E12.5 retina GGAGCAGGAC (5) 3.8 0.0038 E12.5 retina GCTTGAAGGG (2) 1.9 0.0019 E12.5 retina GTAGCCTAAC 1.9 0.0019 E14.5 retina GGAGCAGGAC (5) 3.6 0.0036 E14.5 retina GCACAGGAGG (2) 1.8 0.0018 E16.5 retina GGAGCAGGAC (5) 3.6 0.0036 E16.5 retina TCCTATGAGC (2) 1.8 0.0018 E16.5 retina TGGGTGGCAG (5) 1.8 0.0018 E18.5 retina GGAGCAGGAC (5) 5.5 0.0055 E18.5 retina TGGGTGGCAG (5) 1.8 0.0018 P0.5 retina GGAGCAGGAC (5) 11.8 0.0118 P2.5 retina GGAGCAGGAC (5) 19.4 0.0194 P4.5 retina GGAGCAGGAC (5) 9.9 0.0099 P4.5 retina GTGGTGATGA (2) 2 0.002 P4.5 retina TGGCTTCCTC (3) 2 0.002 P6.5 retina GGAGCAGGAC (5) 31.7 0.0317 P6.5 retina TGGGTGGCAG (5) 3.3 0.0033 P6.5 retina GTAGCCTAAC 1.7 0.0017 P10.5 crx- retina GGAGCAGGAC (5) 35.3 0.0353 P10.5 crx- retina GCACAGGAGG (2) 1.9 0.0019 P10.5 crx+ retina GGAGCAGGAC (5) 17.3 0.0173 P10.5 crx+ retina GCACAGGAGG (2) 1.9 0.0019 P10.5 crx+ retina TCCTATGAGC (2) 1.9 0.0019 Adult retinal GGAGCAGGAC (5) 5.6 0.0056 Adult retinal GCACAGGAGG (2) 1.9 0.0019 ONL GGAGCAGGAC (5) 7.7 0.0077 ONL GCACAGGAGG (2) 1.9 0.0019