Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.221038
D6Ertd245e
DNA segment, Chr 6, ERATO Doi 245, expressed
6
6 35.5 cM
269774
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTGTATGGG
GCCAGCCTTG
TTTTTTTTTT (
2
)
8.1
0.0081
Cb medulloblastoma
TTTTTTTTTT (
2
)
2.3
0.0023
P8 GC+1d culture
GCCAGCCTTG
TCATTTTGAG
(
2
)
TTTTTTTTTT (
2
)
15.9
0.0159
P8 GC+SHH+1d culture
TTTTTTTTTT (
2
)
5.9
0.0059
3T3 fibroblasts
CCTGTATGGG
10.5
0.0105
E15 cortex
TTTTTTTTTT (
2
)
4.9
0.0049
P1 cortex
CCTGTATGGG
TTTTTTTTTT (
2
)
9
0.009
Hypothalamus
TCATTTTGAG
(
2
)
TTTTTTTTTT (
2
)
9
0.009
E12.5 retina
TTTTTTTTTT (
2
)
7.5
0.0075
E14.5 retina
CAAACAATCT
TTTTTTTTTT (
2
)
25.5
0.0255
E16.5 retina
GCCAGCCTTG
TTTTTTTTTT (
2
)
7.2
0.0072
E18.5 retina
CAAACAATCT
TTTTTTTTTT (
2
)
12.7
0.0127
P0.5 retina
CCTGTATGGG
TTTTTTTTTT (
2
)
11.8
0.0118
P2.5 retina
TCATTTTGAG
(
2
)
TTTTTTTTTT (
2
)
10.5
0.0105
P4.5 retina
TCATTTTGAG
(
2
)
TTTTTTTTTT (
2
)
15.8
0.0158
P6.5 retina
CAAACAATCT
TTTTTTTTTT (
2
)
11.6
0.0116
P10.5 crx- retina
CAAACAATCT
TCATTTTGAG
(
2
)
3.8
0.0038
P10.5 crx+ retina
TTTTTTTTTT (
2
)
3.8
0.0038
Adult retinal
CAAACAATCT
TTTTTTTTTT (
2
)
9.3
0.0093
ONL
TTTTTTTTTT (
2
)
3.8
0.0038
