Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.221271	2810468A05Rik	RIKEN cDNA 2810468A05 gene	11		72781
Mm.221271	Ccm2	cerebral cavernous malformation 2 homolog (human)	11		216527
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	CCM2[cerebral cavernous malformation 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 64 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCAGCCTA (6) 16.3 0.0163 P8 Cb GC ACTTTCCTCT (3) 6.5 0.0065 P8 Cb GC TGGATAATTT (2) 3.3 0.0033 P8 Cb GC GACCAGGACT (8) 1.6 0.0016 P8 Cb GC GAGGAGGAGG (35) 1.6 0.0016 Cb medulloblastoma CTGCAGCCTA (6) 13.9 0.0139 Cb medulloblastoma ACTTTCCTCT (3) 4.6 0.0046 Cb medulloblastoma TGGATAATTT (2) 2.3 0.0023 P8 GC+1d culture CTGCAGCCTA (6) 9.1 0.0091 P8 GC+1d culture TGGATAATTT (2) 1.1 0.0011 P8 GC+SHH+1d culture CTGCAGCCTA (6) 16.4 0.0164 P8 GC+SHH+1d culture ACTTTCCTCT (3) 5.9 0.0059 P8 GC+SHH+1d culture GAGGAGGAGG (35) 1.2 0.0012 P8 GC+SHH+1d culture TGGATAATTT (2) 1.2 0.0012 3T3 fibroblasts CTGCAGCCTA (6) 17.5 0.0175 3T3 fibroblasts ACTTTCCTCT (3) 3.5 0.0035 3T3 fibroblasts GAGGAGGAGG (35) 3.5 0.0035 E15 cortex ACTTTCCTCT (3) 4.9 0.0049 E15 cortex GAGGAGGAGG (35) 4.9 0.0049 P1 cortex GAGGAGGAGG (35) 4.5 0.0045 Hypothalamus CTGCAGCCTA (6) 21.7 0.0217 Hypothalamus GAGGAGGAGG (35) 7.2 0.0072 Hypothalamus ACTTTCCTCT (3) 5.4 0.0054 Hypothalamus TGGATAATTT (2) 3.6 0.0036 E12.5 retina CTGCAGCCTA (6) 11.3 0.0113 E12.5 retina ACTTTCCTCT (3) 5.6 0.0056 E12.5 retina GAGGAGGAGG (35) 1.9 0.0019 E14.5 retina ACTTTCCTCT (3) 7.3 0.0073 E14.5 retina CTGCAGCCTA (6) 7.3 0.0073 E14.5 retina GACCAGGACT (8) 3.6 0.0036 E16.5 retina CTGCAGCCTA (6) 21.7 0.0217 E16.5 retina ACTTTCCTCT (3) 10.9 0.0109 E16.5 retina TGGATAATTT (2) 1.8 0.0018 E18.5 retina CTGCAGCCTA (6) 34.6 0.0346 E18.5 retina ACTTTCCTCT (3) 5.5 0.0055 E18.5 retina TGGATAATTT (2) 3.6 0.0036 P0.5 retina CTGCAGCCTA (6) 7.9 0.0079 P0.5 retina TGGATAATTT (2) 3.9 0.0039 P0.5 retina ACTTTCCTCT (3) 2 0.002 P2.5 retina CTGCAGCCTA (6) 21.1 0.0211 P2.5 retina ACTTTCCTCT (3) 12.3 0.0123 P2.5 retina TGGATAATTT (2) 3.5 0.0035 P2.5 retina GAGGAGGAGG (35) 1.8 0.0018 P4.5 retina CTGCAGCCTA (6) 23.8 0.0238 P4.5 retina ACTTTCCTCT (3) 7.9 0.0079 P4.5 retina GAGGAGGAGG (35) 2 0.002 P4.5 retina TGGATAATTT (2) 2 0.002 P6.5 retina CTGCAGCCTA (6) 20 0.02 P6.5 retina ACTTTCCTCT (3) 5 0.005 P6.5 retina TGGATAATTT (2) 1.7 0.0017 P10.5 crx- retina CTGCAGCCTA (6) 20.4 0.0204 P10.5 crx- retina ACTTTCCTCT (3) 5.6 0.0056 P10.5 crx- retina GAGGAGGAGG (35) 1.9 0.0019 P10.5 crx- retina TGGATAATTT (2) 1.9 0.0019 P10.5 crx+ retina CTGCAGCCTA (6) 26.9 0.0269 P10.5 crx+ retina ACTTTCCTCT (3) 1.9 0.0019 P10.5 crx+ retina TGGATAATTT (2) 1.9 0.0019 Adult retinal CTGCAGCCTA (6) 13 0.013 Adult retinal ACTTTCCTCT (3) 3.7 0.0037 Adult retinal GAGGAGGAGG (35) 3.7 0.0037 ONL CTGCAGCCTA (6) 11.5 0.0115 ONL ACTTTCCTCT (3) 3.8 0.0038 ONL GAGGAGGAGG (35) 1.9 0.0019 ONL TGGATAATTT (2) 1.9 0.0019