Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.221403 Pdgfraplatelet derived growth factor receptor, alpha polypeptide 5  5 C3.3 (5 42.0 cM)  18595 
 Gene Ontology ATP binding | extracellular space | integral to membrane | kinase activity | male genital morphogenesis | membrane | organogenesis | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | protein-tyrosine kinase activity | receptor activity | transferase activity | transmembrane receptor protein tyrosine kinase activity | transmembrane receptor protein tyrosine kinase signaling pathway | vascular endothelial growth factor receptor activity
 Human Homolog PDGFRA[platelet-derived growth factor receptor, alpha polypeptide]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 120 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCAAGAACTAGC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
CTCATTCTGG
TATTTTTTTC (3)
TCAGTATTTT
TTCTATGTGT
TTTTGTTTTA
130.60.1306
Cb medulloblastomaAAGAACTAGC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TATTTTTTTC (3)
TTTTGTTTTA
71.60.0716
P8 GC+1d cultureAAGAACTAGC (2)
AAGAGAGTCA
ATTTCTTTAC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TATTTTTTTC (3)
TCAGTATTTT
TTCTATGTGT
TTTTGTTTTA
95.60.0956
P8 GC+SHH+1d cultureAAGAACTAGC (2)
ATTTCTTTAC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
CTCATTCTGG
TCAGTATTTT
TTCTATGTGT
TTTTGTTTTA
71.60.0716
3T3 fibroblastsCACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
GTGGTGTGGT (2)
TTCTATGTGT
TTTTGTTTTA
378.50.3785
E15 cortexCACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
93.90.0939
P1 cortexAAGAACTAGC (2)
CAAGGAAGGC
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
204.40.2044
HypothalamusAAGAACTAGC (2)
AAGAGAGTCA
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
470.047
E12.5 retinaAAGAACTAGC (2)
ATGGATATGT
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TTCTATGTGT
TTTTGTTTTA
127.80.1278
E14.5 retinaAAGAGAGTCA
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TATTTTTTTC (3)
138.50.1385
E16.5 retinaAAGAGAGTCA
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
92.30.0923
E18.5 retinaAAGAACTAGC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
50.80.0508
P0.5 retinaAAGAACTAGC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TTCTATGTGT
121.70.1217
P2.5 retinaAAGAACTAGC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TATTTTTTTC (3)
103.80.1038
P4.5 retinaAAGAACTAGC (2)
CAAGGAAGGC
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TTTTGTTTTA
85.30.0853
P6.5 retinaAAGAACTAGC (2)
ATGGATATGT
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
GTGGTGTGGT (2)
TTCTATGTGT
TTTTGTTTTA
113.50.1135
P10.5 crx- retinaAAGAACTAGC (2)
AAGAGAGTCA
CAAGGAAGGC
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TTCTATGTGT
89.30.0893
P10.5 crx+ retinaAAGAACTAGC (2)
CAAGGAAGGC
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
TTCTATGTGT
710.071
Adult retinalCACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
146.30.1463
ONLATGGATATGT
ATTTCTTTAC (2)
CACCACCACA
CCTGTAATCC (2)
CCTTTAATCC (3)
GTGGTGTGGT (2)
TTTTGTTTTA
139.80.1398