Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.221404
A430107O13Rik
RIKEN cDNA A430107O13 gene
6
214642
Human Homolog
FLJ21986[hypothetical protein FLJ21986]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 53 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AATAAAAAAA (
9
)
1.6
0.0016
P8 Cb GC
CTTATGAAAA
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
AGCAAAAAAA
(
12
)
23.1
0.0231
Cb medulloblastoma
AATAAAAAAA (
9
)
6.9
0.0069
Cb medulloblastoma
ATCAGAATAT
(
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AATAAAAAAA (
9
)
1.1
0.0011
P8 GC+1d culture
AGCAAAAAAA
(
12
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
AGCAAAAAAA
(
12
)
5.9
0.0059
P8 GC+SHH+1d culture
AATAAAAAAA (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
ATCAGAATAT
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CTTATGAAAA
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
AATAAAAAAA (
9
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AATAAAAAAA (
9
)
4.9
0.0049
E15 cortex
AGCAAAAAAA
(
12
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AATAAAAAAA (
9
)
5.4
0.0054
Hypothalamus
AGCAAAAAAA
(
12
)
5.4
0.0054
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AATAAAAAAA (
9
)
3.8
0.0038
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
AATAAAAAAA (
9
)
1.8
0.0018
E14.5 retina
AGCAAAAAAA
(
12
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
AGCAAAAAAA
(
12
)
9.1
0.0091
E18.5 retina
AATAAAAAAA (
9
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
AGCAAAAAAA
(
12
)
8.8
0.0088
P2.5 retina
ATCAGAATAT
(
4
)
1.8
0.0018
P2.5 retina
CTTATGAAAA
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AGCAAAAAAA
(
12
)
5.9
0.0059
P4.5 retina
AATAAAAAAA (
9
)
4
0.004
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
AGCAAAAAAA
(
12
)
6.7
0.0067
P6.5 retina
AATAAAAAAA (
9
)
3.3
0.0033
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
CTTATGAAAA
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AGCAAAAAAA
(
12
)
7.7
0.0077
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AATAAAAAAA (
9
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
ATCAGAATAT
(
4
)
3.8
0.0038
ONL
AGCAAAAAAA
(
12
)
1.9
0.0019
