Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.222	Trp53	transformation related protein 53	11	11 39.0 cM	22059
Gene Ontology	apoptosis | cell cycle | cytoplasm | cytosol | DNA binding | DNA damage response, signal transduction by p53 class mediator | DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis | DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis | negative regulation of apoptosis | negative regulation of cell cycle | negative regulation of DNA replication | negative regulation of DNA replication | negative regulation of fibroblast proliferation | nucleus | protein binding | protein-nucleus import, translocation | regulation of cell proliferation | regulation of transcription, DNA-dependent | response to DNA damage stimulus | response to UV | response to X-ray | transcription factor activity
Human Homolog	TP53[tumor protein p53 (Li-Fraumeni syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 16 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTACAGAGGA 6.5 0.0065 Cb medulloblastoma GCCCCCAGGC (6) 2.3 0.0023 P8 GC+1d culture CTACAGAGGA 5.7 0.0057 P8 GC+SHH+1d culture CTACAGAGGA 3.5 0.0035 P8 GC+SHH+1d culture CCTACAAGAA (4) 1.2 0.0012 3T3 fibroblasts CTACAGAGGA 7 0.007 E15 cortex CTACAGAGGA 4.9 0.0049 E15 cortex GCCCCCAGGC (6) 4.9 0.0049 E12.5 retina CTACAGAGGA 1.9 0.0019 E14.5 retina CCTACAAGAA (4) 1.8 0.0018 P0.5 retina CTACAGAGGA 2 0.002 P4.5 retina CCTACAAGAA (4) 2 0.002 P6.5 retina CTACAGAGGA 1.7 0.0017 P10.5 crx- retina GCCCCCAGGC (6) 1.9 0.0019 Adult retinal CCTACAAGAA (4) 1.9 0.0019 Adult retinal CTACAGAGGA 1.9 0.0019