Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.222310
C80918
expressed sequence C80918
2
97008
Mm.222310
B130033B12Rik
RIKEN cDNA B130033B12 gene
2
99149
Mm.222310
9630019E01Rik
RIKEN cDNA 9630019E01 gene
2
319967
Mm.222310
BC053994
cDNA sequence BC053994
2
381383
Mm.222310
A230067G21Rik
RIKEN cDNA A230067G21 gene
2
241694
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 21 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTGACCTCCC
(
6
)
CTGTAAAAAT
(
5
)
TTTCTGACAT
(
6
)
6.5
0.0065
Cb medulloblastoma
CTGACCTCCC
(
6
)
2.3
0.0023
P8 GC+1d culture
CTGACCTCCC
(
6
)
TTTCTGACAT
(
6
)
2.2
0.0022
P8 GC+SHH+1d culture
CTGACCTCCC
(
6
)
1.2
0.0012
E12.5 retina
ACATTTCCCA
(
6
)
CTGTAAAAAT
(
5
)
3.8
0.0038
E14.5 retina
TTTCTGACAT
(
6
)
1.8
0.0018
E16.5 retina
ACATTTCCCA
(
6
)
1.8
0.0018
E18.5 retina
TTTCTGACAT
(
6
)
3.6
0.0036
P2.5 retina
ACATTTCCCA
(
6
)
TTTCTGACAT
(
6
)
5.3
0.0053
P6.5 retina
TTTCTGACAT
(
6
)
1.7
0.0017
P10.5 crx- retina
CTGTAAAAAT
(
5
)
TTTCTGACAT
(
6
)
9.3
0.0093
Adult retinal
CTGTAAAAAT
(
5
)
TTTCTGACAT
(
6
)
7.5
0.0075
ONL
CTGTAAAAAT
(
5
)
TTTCTGACAT
(
6
)
3.8
0.0038
