Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22252	Tbc1d15	TBC1 domain family, member 15	10		66687
Gene Ontology	mitochondrion
Human Homolog	TBC1D15[TBC1 domain family, member 15]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 119 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACAGTGCCTG (5) 11.4 0.0114 P8 Cb GC GCGGCGGCGG (24) 6.5 0.0065 P8 Cb GC TTCCCAAAAA (5) 4.9 0.0049 P8 Cb GC CTGCCTGCCC (5) 3.3 0.0033 Cb medulloblastoma CTGCCTGCCC (5) 13.9 0.0139 Cb medulloblastoma ACAGTGCCTG (5) 9.2 0.0092 Cb medulloblastoma GCGGCGGCGG (24) 4.6 0.0046 Cb medulloblastoma CTTTAAGTTT (4) 2.3 0.0023 Cb medulloblastoma GTAGGATCTT (3) 2.3 0.0023 Cb medulloblastoma TTCCCAAAAA (5) 2.3 0.0023 Cb medulloblastoma TTTTTAAGTT (4) 2.3 0.0023 P8 GC+1d culture ACAGTGCCTG (5) 14.8 0.0148 P8 GC+1d culture CTGCCTGCCC (5) 10.3 0.0103 P8 GC+1d culture GCGGCGGCGG (24) 4.6 0.0046 P8 GC+1d culture TTCCCAAAAA (5) 3.4 0.0034 P8 GC+1d culture TTTTTAAGTT (4) 2.3 0.0023 P8 GC+1d culture AGCACAAAAA 1.1 0.0011 P8 GC+SHH+1d culture GCGGCGGCGG (24) 16.4 0.0164 P8 GC+SHH+1d culture CTGCCTGCCC (5) 11.7 0.0117 P8 GC+SHH+1d culture ACAGTGCCTG (5) 8.2 0.0082 P8 GC+SHH+1d culture TTCCCAAAAA (5) 7 0.007 P8 GC+SHH+1d culture TTTTTAAGTT (4) 3.5 0.0035 P8 GC+SHH+1d culture GTCAGAATAA 2.3 0.0023 P8 GC+SHH+1d culture GTAGGATCTT (3) 1.2 0.0012 3T3 fibroblasts ACAGTGCCTG (5) 3.5 0.0035 3T3 fibroblasts CTGCCTGCCC (5) 3.5 0.0035 3T3 fibroblasts GCGGCGGCGG (24) 3.5 0.0035 E15 cortex CTGCCTGCCC (5) 59.4 0.0594 E15 cortex ACAGTGCCTG (5) 4.9 0.0049 E15 cortex GCCTTCAATA (5) 4.9 0.0049 E15 cortex TTCCCAAAAA (5) 4.9 0.0049 P1 cortex CTGCCTGCCC (5) 81.8 0.0818 P1 cortex GCTTCAATAT (5) 9.1 0.0091 P1 cortex ACAGTGCCTG (5) 4.5 0.0045 P1 cortex CAGGAAATTG 4.5 0.0045 P1 cortex GTCAGAATAA 4.5 0.0045 P1 cortex TTCCCAAAAA (5) 4.5 0.0045 Hypothalamus CTGCCTGCCC (5) 12.7 0.0127 Hypothalamus ACAGTGCCTG (5) 10.9 0.0109 Hypothalamus GCGGCGGCGG (24) 7.2 0.0072 Hypothalamus AAACTAAAAA 1.8 0.0018 Hypothalamus AGCACAAAAA 1.8 0.0018 Hypothalamus CAGGAAATTG 1.8 0.0018 Hypothalamus CTTTAAGTTT (4) 1.8 0.0018 E12.5 retina GCGGCGGCGG (24) 15 0.015 E12.5 retina ACAGTGCCTG (5) 13.1 0.0131 E12.5 retina CAGGAAATTG 1.9 0.0019 E12.5 retina CTTTAAGTTT (4) 1.9 0.0019 E12.5 retina GCCTTCAATA (5) 1.9 0.0019 E12.5 retina GTAGGATCTT (3) 1.9 0.0019 E12.5 retina GTCAGAATAA 1.9 0.0019 E12.5 retina TTTTTAAGTT (4) 1.9 0.0019 E14.5 retina CTGCCTGCCC (5) 14.6 0.0146 E14.5 retina ACAGTGCCTG (5) 10.9 0.0109 E14.5 retina GCGGCGGCGG (24) 5.5 0.0055 E14.5 retina GCTTCAATAT (5) 1.8 0.0018 E14.5 retina GTAGGATCTT (3) 1.8 0.0018 E14.5 retina TTCCCAAAAA (5) 1.8 0.0018 E16.5 retina CTGCCTGCCC (5) 23.5 0.0235 E16.5 retina GCGGCGGCGG (24) 14.5 0.0145 E16.5 retina ACAGTGCCTG (5) 10.9 0.0109 E16.5 retina GCTTCAATAT (5) 3.6 0.0036 E16.5 retina GCAGGAAATG (3) 1.8 0.0018 E16.5 retina GTAGGATCTT (3) 1.8 0.0018 E16.5 retina TTTTTAAGTT (4) 1.8 0.0018 E18.5 retina ACAGTGCCTG (5) 14.6 0.0146 E18.5 retina CTGCCTGCCC (5) 9.1 0.0091 E18.5 retina GCGGCGGCGG (24) 9.1 0.0091 E18.5 retina GTCAGAATAA 3.6 0.0036 E18.5 retina TTTTTAAGTT (4) 3.6 0.0036 E18.5 retina TTCCCAAAAA (5) 1.8 0.0018 P0.5 retina CTGCCTGCCC (5) 19.6 0.0196 P0.5 retina ACAGTGCCTG (5) 9.8 0.0098 P0.5 retina GCGGCGGCGG (24) 7.9 0.0079 P0.5 retina GTAGGATCTT (3) 3.9 0.0039 P0.5 retina GCAGGAAATG (3) 2 0.002 P2.5 retina CTGCCTGCCC (5) 21.1 0.0211 P2.5 retina ACAGTGCCTG (5) 14.1 0.0141 P2.5 retina GCGGCGGCGG (24) 7 0.007 P2.5 retina TTTTTAAGTT (4) 3.5 0.0035 P2.5 retina GCAGGAAATG (3) 1.8 0.0018 P2.5 retina GCTTCAATAT (5) 1.8 0.0018 P4.5 retina ACAGTGCCTG (5) 13.9 0.0139 P4.5 retina CTGCCTGCCC (5) 9.9 0.0099 P4.5 retina TTTTTAAGTT (4) 5.9 0.0059 P4.5 retina GCGGCGGCGG (24) 4 0.004 P4.5 retina GCAGGAAATG (3) 2 0.002 P4.5 retina GTCAGAATAA 2 0.002 P6.5 retina ACAGTGCCTG (5) 16.7 0.0167 P6.5 retina GCAGGAAATG (3) 6.7 0.0067 P6.5 retina CTGCCTGCCC (5) 5 0.005 P6.5 retina GCGGCGGCGG (24) 5 0.005 P6.5 retina TTTTTAAGTT (4) 3.3 0.0033 P6.5 retina AGCACAAAAA 1.7 0.0017 P6.5 retina CAGGAAATTG 1.7 0.0017 P6.5 retina TTCCCAAAAA (5) 1.7 0.0017 P10.5 crx- retina CTGCCTGCCC (5) 29.7 0.0297 P10.5 crx- retina ACAGTGCCTG (5) 7.4 0.0074 P10.5 crx- retina TTTTTAAGTT (4) 7.4 0.0074 P10.5 crx- retina GCAGGAAATG (3) 1.9 0.0019 P10.5 crx- retina GCGGCGGCGG (24) 1.9 0.0019 P10.5 crx- retina GTCAGAATAA 1.9 0.0019 P10.5 crx+ retina ACAGTGCCTG (5) 21.1 0.0211 P10.5 crx+ retina CTGCCTGCCC (5) 17.3 0.0173 P10.5 crx+ retina GCGGCGGCGG (24) 15.4 0.0154 P10.5 crx+ retina AAACTAAAAA 1.9 0.0019 P10.5 crx+ retina CTTTAAGTTT (4) 1.9 0.0019 P10.5 crx+ retina TTTTTAAGTT (4) 1.9 0.0019 Adult retinal GCGGCGGCGG (24) 16.7 0.0167 Adult retinal CTGCCTGCCC (5) 3.7 0.0037 Adult retinal TTTTTAAGTT (4) 3.7 0.0037 Adult retinal AAACTAAAAA 1.9 0.0019 Adult retinal ACAGTGCCTG (5) 1.9 0.0019 Adult retinal GCAGGAAATG (3) 1.9 0.0019 Adult retinal GCCTTCAATA (5) 1.9 0.0019 ONL GCGGCGGCGG (24) 9.6 0.0096 ONL AAACTAAAAA 1.9 0.0019 ONL ACAGTGCCTG (5) 1.9 0.0019 ONL TTTTTAAGTT (4) 1.9 0.0019