Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.222956
BC026682
cDNA sequence BC026682
4
230579
Human Homolog
LOC285303[similar to MGC27169 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGTGTGCCCA
1.6
0.0016
Cb medulloblastoma
AAACTGCCAC
(
2
)
GGTGTGCCCA
6.9
0.0069
P8 GC+1d culture
GGTGTGCCCA
TGTGTGTGTA (
2
)
6.9
0.0069
3T3 fibroblasts
GGTGTGCCCA
GTTGGAAACA
TGAGACTGTG (
2
)
28
0.028
E15 cortex
GTTGGAAACA
TGTGTGTGTA (
2
)
19.7
0.0197
P1 cortex
GTTGGAAACA
13.6
0.0136
Hypothalamus
AAACTGCCAC
(
2
)
GTTGGAAACA
TGTGTGTGTA (
2
)
5.4
0.0054
E16.5 retina
GTTGGAAACA
TGTGTGTGTA (
2
)
3.6
0.0036
P0.5 retina
TGTGTGTGTA (
2
)
7.9
0.0079
P4.5 retina
TGTGTGTGTA (
2
)
2
0.002
P6.5 retina
GTTGGAAACA
TGTGTGTGTA (
2
)
6.7
0.0067
P10.5 crx- retina
GGTGTGCCCA
TGTGTGTGTA (
2
)
11.2
0.0112
P10.5 crx+ retina
AAACTGCCAC
(
2
)
1.9
0.0019
Adult retinal
GTTGGAAACA
TGTGTGTGTA (
2
)
9.3
0.0093
ONL
TGTGTGTGTA (
2
)
3.8
0.0038
