Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.22314
C86187
expressed sequence C86187
7
97402
Gene Ontology
biological_process unknown
|
cellular_component unknown
|
molecular_function unknown
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTTCCAAT (
3
)
223.5
0.2235
P8 Cb GC
TGGGAAAGAT (
4
)
6.5
0.0065
P8 Cb GC
TGAACCCCGG
(
2
)
1.6
0.0016
P8 Cb GC
TGAGCCCCTG (
5
)
1.6
0.0016
Cb medulloblastoma
GCCTTCCAAT (
3
)
115.6
0.1156
Cb medulloblastoma
TGGGAAAGAT (
4
)
6.9
0.0069
P8 GC+1d culture
GCCTTCCAAT (
3
)
114.2
0.1142
P8 GC+1d culture
TGGGAAAGAT (
4
)
3.4
0.0034
P8 GC+1d culture
TGAGCCCCTG (
5
)
2.3
0.0023
P8 GC+1d culture
TGTCAGCCCT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCTTCCAAT (
3
)
144
0.144
P8 GC+SHH+1d culture
TGGGAAAGAT (
4
)
17.6
0.0176
P8 GC+SHH+1d culture
TGAGCCCCTG (
5
)
2.3
0.0023
P8 GC+SHH+1d culture
TGTCAGCCCT
(
2
)
1.2
0.0012
3T3 fibroblasts
GCCTTCCAAT (
3
)
21
0.021
3T3 fibroblasts
TGAGCCCCTG (
5
)
14
0.014
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
3T3 fibroblasts
TGGGAAAGAT (
4
)
10.5
0.0105
E15 cortex
GCCTTCCAAT (
3
)
59.4
0.0594
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
E15 cortex
TGGGAAAGAT (
4
)
4.9
0.0049
P1 cortex
GCCTTCCAAT (
3
)
27.3
0.0273
P1 cortex
TGGGAAAGAT (
4
)
22.7
0.0227
Hypothalamus
GCCTTCCAAT (
3
)
56.1
0.0561
Hypothalamus
TGAGCCCCTG (
5
)
1.8
0.0018
Hypothalamus
TGGGAAAGAT (
4
)
1.8
0.0018
Hypothalamus
TGTCAGCCCT
(
2
)
1.8
0.0018
E12.5 retina
GCCTTCCAAT (
3
)
101.4
0.1014
E12.5 retina
TGGGAAAGAT (
4
)
13.1
0.0131
E12.5 retina
TGAGCCCCTG (
5
)
1.9
0.0019
E12.5 retina
TGTCAGCCCT
(
2
)
1.9
0.0019
E14.5 retina
GCCTTCCAAT (
3
)
107.5
0.1075
E14.5 retina
TGAGCCCCTG (
5
)
1.8
0.0018
E14.5 retina
TGGGAAAGAT (
4
)
1.8
0.0018
E16.5 retina
GCCTTCCAAT (
3
)
77.9
0.0779
E16.5 retina
TGGGAAAGAT (
4
)
18.1
0.0181
E18.5 retina
GCCTTCCAAT (
3
)
203.7
0.2037
E18.5 retina
TGGGAAAGAT (
4
)
9.1
0.0091
E18.5 retina
TGAACCCCGG
(
2
)
1.8
0.0018
P0.5 retina
GCCTTCCAAT (
3
)
84.4
0.0844
P0.5 retina
TGGGAAAGAT (
4
)
9.8
0.0098
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TGAACCCCGG
(
2
)
2
0.002
P2.5 retina
GCCTTCCAAT (
3
)
184.8
0.1848
P2.5 retina
TGGGAAAGAT (
4
)
14.1
0.0141
P2.5 retina
TGAGCCCCTG (
5
)
3.5
0.0035
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P4.5 retina
GCCTTCCAAT (
3
)
225.9
0.2259
P4.5 retina
TGGGAAAGAT (
4
)
13.9
0.0139
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
GCCTTCCAAT (
3
)
173.4
0.1734
P6.5 retina
TGGGAAAGAT (
4
)
11.7
0.0117
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P10.5 crx- retina
GCCTTCCAAT (
3
)
46.4
0.0464
P10.5 crx- retina
TGGGAAAGAT (
4
)
9.3
0.0093
P10.5 crx- retina
TGAGCCCCTG (
5
)
5.6
0.0056
P10.5 crx+ retina
GCCTTCCAAT (
3
)
111.5
0.1115
P10.5 crx+ retina
TGAGCCCCTG (
5
)
3.8
0.0038
P10.5 crx+ retina
TGGGAAAGAT (
4
)
3.8
0.0038
Adult retinal
GCCTTCCAAT (
3
)
105.5
0.1055
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
Adult retinal
TGGGAAAGAT (
4
)
1.9
0.0019
ONL
GCCTTCCAAT (
3
)
118.8
0.1188
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
TGAGCCCCTG (
5
)
1.9
0.0019
