Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.223946	2610019N13Rik	RIKEN cDNA 2610019N13 gene	3		69207
Human Homolog	SFRS11[splicing factor, arginine/serine-rich 11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 107 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGATGTACA 24.5 0.0245 P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC GCACAGACTG (3) 3.3 0.0033 P8 Cb GC TTTTTCAAAA (7) 3.3 0.0033 P8 Cb GC AAGAGAGTGC 1.6 0.0016 P8 Cb GC AGCAGCACGG (2) 1.6 0.0016 P8 Cb GC CACAGTTGTG (2) 1.6 0.0016 P8 Cb GC TCCCCTCCCC (7) 1.6 0.0016 P8 Cb GC TCGTTGGTCA 1.6 0.0016 P8 Cb GC TGCTTTTAAA (3) 1.6 0.0016 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma TTGATGTACA 4.6 0.0046 Cb medulloblastoma GACAAAATAA (7) 2.3 0.0023 P8 GC+1d culture TTGATGTACA 13.7 0.0137 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture AGCAGCACGG (2) 1.1 0.0011 P8 GC+1d culture CACAGTTGTG (2) 1.1 0.0011 P8 GC+1d culture TTTTTCAAAA (7) 1.1 0.0011 P8 GC+SHH+1d culture TTGATGTACA 16.4 0.0164 P8 GC+SHH+1d culture ACCAAATTAA (2) 2.3 0.0023 P8 GC+SHH+1d culture GACAAAATAA (7) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture ACTTAAAAAT (4) 1.2 0.0012 P8 GC+SHH+1d culture CACAGTTGTG (2) 1.2 0.0012 P8 GC+SHH+1d culture TCGTTGGTCA 1.2 0.0012 P8 GC+SHH+1d culture TTTTTCAAAA (7) 1.2 0.0012 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts AAGAGAGTGC 7 0.007 3T3 fibroblasts CACAGTTGTG (2) 7 0.007 3T3 fibroblasts AGCAGCACGG (2) 3.5 0.0035 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex AAGAGAGTGC 4.9 0.0049 E15 cortex CACAGTTGTG (2) 4.9 0.0049 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex TTGATGTACA 18.2 0.0182 Hypothalamus TTGATGTACA 16.3 0.0163 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus AAGAGAGTGC 1.8 0.0018 Hypothalamus CCTGTCCTGT (2) 1.8 0.0018 Hypothalamus GAATCACTGT 1.8 0.0018 Hypothalamus TTTTTCAAAA (7) 1.8 0.0018 E12.5 retina TTGATGTACA 26.3 0.0263 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina ACCAAATTAA (2) 1.9 0.0019 E12.5 retina CACAGTTGTG (2) 1.9 0.0019 E12.5 retina CCTGTCCTGT (2) 1.9 0.0019 E12.5 retina GAATCACTGT 1.9 0.0019 E12.5 retina TCGTTGGTCA 1.9 0.0019 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina TTGATGTACA 10.9 0.0109 E14.5 retina TGCTTTTAAA (3) 3.6 0.0036 E14.5 retina AAGAGAGTGC 1.8 0.0018 E14.5 retina ACCAAATTAA (2) 1.8 0.0018 E14.5 retina TTTTTCAAAA (7) 1.8 0.0018 E16.5 retina TTGATGTACA 27.2 0.0272 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina AAGGTCAATT (3) 3.6 0.0036 E16.5 retina CACAGTTGTG (2) 3.6 0.0036 E16.5 retina ACCAAATTAA (2) 1.8 0.0018 E16.5 retina GCACAGACTG (3) 1.8 0.0018 E16.5 retina TTTTTCAAAA (7) 1.8 0.0018 E18.5 retina TTGATGTACA 21.8 0.0218 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina TGCTTTTAAA (3) 3.6 0.0036 E18.5 retina TTTTTCAAAA (7) 1.8 0.0018 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina CACAGTTGTG (2) 19.6 0.0196 P0.5 retina TTGATGTACA 15.7 0.0157 P0.5 retina TCGTTGGTCA 2 0.002 P2.5 retina TTGATGTACA 35.2 0.0352 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina AAGGTCAATT (3) 3.5 0.0035 P2.5 retina AAGAGAGTGC 1.8 0.0018 P2.5 retina GAATCACTGT 1.8 0.0018 P2.5 retina TGCTTTTAAA (3) 1.8 0.0018 P2.5 retina TTTTTCAAAA (7) 1.8 0.0018 P4.5 retina TTGATGTACA 27.7 0.0277 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina ACCAAATTAA (2) 2 0.002 P4.5 retina CCTGTCCTGT (2) 2 0.002 P4.5 retina TCGTTGGTCA 2 0.002 P4.5 retina TGCTTTTAAA (3) 2 0.002 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina TTGATGTACA 28.3 0.0283 P6.5 retina CACAGTTGTG (2) 3.3 0.0033 P6.5 retina AAGAGAGTGC 1.7 0.0017 P6.5 retina ACTTAAAAAT (4) 1.7 0.0017 P6.5 retina TGCTTTTAAA (3) 1.7 0.0017 P10.5 crx- retina TTGATGTACA 18.6 0.0186 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina CACAGTTGTG (2) 7.4 0.0074 P10.5 crx- retina TGCTTTTAAA (3) 3.7 0.0037 P10.5 crx- retina TCCCCTCCCC (7) 1.9 0.0019 P10.5 crx- retina TCGTTGGTCA 1.9 0.0019 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina TTGATGTACA 15.4 0.0154 P10.5 crx+ retina CACAGTTGTG (2) 1.9 0.0019 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal TTGATGTACA 16.7 0.0167 Adult retinal CACAGTTGTG (2) 9.3 0.0093 Adult retinal AAGAGAGTGC 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL TTGATGTACA 15.3 0.0153 ONL ACCAAATTAA (2) 1.9 0.0019 ONL GCACAGACTG (3) 1.9 0.0019 ONL TCCCCTCCCC (7) 1.9 0.0019 ONL TGCTTTTAAA (3) 1.9 0.0019