Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.223980
Farp1
FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)
14
223254
Mm.223980
1810013H02Rik
RIKEN cDNA 1810013H02 gene
14
69763
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 99 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
AACCAGGACT (
6
)
3.3
0.0033
P8 Cb GC
ATCCAGCACA
(
3
)
3.3
0.0033
P8 Cb GC
CCCACAAGGA
(
3
)
1.6
0.0016
P8 Cb GC
GCGCAGTCTT
(
2
)
1.6
0.0016
P8 Cb GC
TGCCACCACA (
19
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GCGCAGTCTT
(
2
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ATCCAGCACA
(
3
)
3.4
0.0034
P8 GC+1d culture
GCGCAGTCTT
(
2
)
2.3
0.0023
P8 GC+1d culture
AACCAGGACT (
6
)
1.1
0.0011
P8 GC+1d culture
GTTCCTGGTT
(
3
)
1.1
0.0011
P8 GC+1d culture
TACTAGCACT
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ATCCAGCACA
(
3
)
7
0.007
P8 GC+SHH+1d culture
GTTCCTGGTT
(
3
)
3.5
0.0035
P8 GC+SHH+1d culture
AACCAGGACT (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GCGCAGTCTT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGGGGAAAG (
10
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCCACCACA (
19
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GGCCTATCTC
(
4
)
7
0.007
3T3 fibroblasts
TGCCACCACA (
19
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GAACACTCCC
(
5
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
ATCCAGCACA
(
3
)
13.6
0.0136
P1 cortex
GTTCCTGGTT
(
3
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
TGCCACCACA (
19
)
5.4
0.0054
Hypothalamus
ATCCAGCACA
(
3
)
1.8
0.0018
Hypothalamus
GTTCCTGGTT
(
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
AGGGGAGGGG
(
3
)
3.8
0.0038
E12.5 retina
ATCCAGCACA
(
3
)
3.8
0.0038
E12.5 retina
GTTCCTGGTT
(
3
)
3.8
0.0038
E12.5 retina
AACCAGGACT (
6
)
1.9
0.0019
E12.5 retina
GCGCAGTCTT
(
2
)
1.9
0.0019
E12.5 retina
GTGGGGAAAG (
10
)
1.9
0.0019
E12.5 retina
TAATAAAGGC
(
6
)
1.9
0.0019
E12.5 retina
TGCCACCACA (
19
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TGCCACCACA (
19
)
9.1
0.0091
E14.5 retina
ATCCAGCACA
(
3
)
7.3
0.0073
E14.5 retina
AGGGGAGGGG
(
3
)
1.8
0.0018
E14.5 retina
GCGCAGTCTT
(
2
)
1.8
0.0018
E14.5 retina
GTTCCTGGTT
(
3
)
1.8
0.0018
E14.5 retina
TAATAAAGGC
(
6
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
ATCCAGCACA
(
3
)
3.6
0.0036
E16.5 retina
AACCAGGACT (
6
)
1.8
0.0018
E16.5 retina
TACTAGCACT
(
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GAACACTCCC
(
5
)
3.6
0.0036
E18.5 retina
AACCAGGACT (
6
)
1.8
0.0018
E18.5 retina
ATCCAGCACA
(
3
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TGCCACCACA (
19
)
13.7
0.0137
P0.5 retina
AACCAGGACT (
6
)
3.9
0.0039
P0.5 retina
ATCCAGCACA
(
3
)
2
0.002
P0.5 retina
CCCACAAGGA
(
3
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GGCCTATCTC
(
4
)
7
0.007
P2.5 retina
GCGCAGTCTT
(
2
)
3.5
0.0035
P2.5 retina
GTTCCTGGTT
(
3
)
3.5
0.0035
P2.5 retina
AACCAGGACT (
6
)
1.8
0.0018
P2.5 retina
AGGGGAGGGG
(
3
)
1.8
0.0018
P2.5 retina
ATCCAGCACA
(
3
)
1.8
0.0018
P2.5 retina
TAATAAAGGC
(
6
)
1.8
0.0018
P2.5 retina
TGCCACCACA (
19
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
ATCCAGCACA
(
3
)
4
0.004
P4.5 retina
AACCAGGACT (
6
)
2
0.002
P4.5 retina
GTTCCTGGTT
(
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGCCACCACA (
19
)
8.3
0.0083
P6.5 retina
AACCAGGACT (
6
)
1.7
0.0017
P6.5 retina
GTTCCTGGTT
(
3
)
1.7
0.0017
P6.5 retina
TACTAGCACT
(
3
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GTTCCTGGTT
(
3
)
5.6
0.0056
P10.5 crx- retina
TGCCACCACA (
19
)
3.7
0.0037
P10.5 crx- retina
AACCAGGACT (
6
)
1.9
0.0019
P10.5 crx- retina
ATCCAGCACA
(
3
)
1.9
0.0019
P10.5 crx- retina
GGCCTATCTC
(
4
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
AGGGGAGGGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
TGCCACCACA (
19
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TGCCACCACA (
19
)
5.6
0.0056
Adult retinal
AACCAGGACT (
6
)
3.7
0.0037
Adult retinal
GTGGGGAAAG (
10
)
1.9
0.0019
Adult retinal
TACTAGCACT
(
3
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GCGCAGTCTT
(
2
)
3.8
0.0038
ONL
GTGGGGAAAG (
10
)
1.9
0.0019
ONL
GTTCCTGGTT
(
3
)
1.9
0.0019
ONL
TGCCACCACA (
19
)
1.9
0.0019