| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTTTGGCAA (2) TTTTCTGGTT (3)
| 37.5 | 0.0375 |
| Cb medulloblastoma | CCTTTGGCAA (2)
| 20.8 | 0.0208 |
| P8 GC+1d culture | CCTTTGGCAA (2) GGTTCTGGCT (2)
| 19.4 | 0.0194 |
| P8 GC+SHH+1d culture | CCTTTGGCAA (2) TTTTCTGGTT (3)
| 31.6 | 0.0316 |
| 3T3 fibroblasts | CCTTTGGCAA (2)
| 14 | 0.014 |
| E15 cortex | CCTTTGGCAA (2)
| 59.4 | 0.0594 |
| P1 cortex | CCTTTGGCAA (2) GGTTCTGGCT (2)
| 18.1 | 0.0181 |
| Hypothalamus | CCTTTGGCAA (2) TTTTCTGGTT (3)
| 23.5 | 0.0235 |
| E12.5 retina | CCTTTGGCAA (2) GGTTCTGGCT (2)
| 41.3 | 0.0413 |
| E14.5 retina | CCTTTGGCAA (2) TTTTCTGGTT (3)
| 23.7 | 0.0237 |
| E16.5 retina | CCTTTGGCAA (2) TTTTCTGGTT (3)
| 23.5 | 0.0235 |
| E18.5 retina | CCTTTGGCAA (2) GGTTCTGGCT (2)
| 34.5 | 0.0345 |
| P0.5 retina | CCTTTGGCAA (2)
| 15.7 | 0.0157 |
| P2.5 retina | CCTTTGGCAA (2)
| 35.2 | 0.0352 |
| P4.5 retina | CCTTTGGCAA (2)
| 17.8 | 0.0178 |
| P6.5 retina | CCTTTGGCAA (2) TTTTCTGGTT (3)
| 26.6 | 0.0266 |
| P10.5 crx- retina | CCTTTGGCAA (2) GGTTCTGGCT (2)
| 39.1 | 0.0391 |
| P10.5 crx+ retina | CCTTTGGCAA (2) GGTTCTGGCT (2) TTTTCTGGTT (3)
| 36.5 | 0.0365 |
| Adult retinal | CCTTTGGCAA (2) GGTTCTGGCT (2)
| 27.8 | 0.0278 |
| ONL | CCTTTGGCAA (2)
| 7.7 | 0.0077 |