Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22478	Arid1a	AT rich interactive domain 1A (Swi1 like)	4		93760
Gene Ontology	DNA binding | establishment and/or maintenance of chromatin architecture | intracellular | nucleus | SWI/SNF complex
Human Homolog	ARID1A[AT rich interactive domain 1A (SWI- like)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 31 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGTCTACCC (2) 3.3 0.0033 P8 Cb GC ACAGCCGTGG (2) 1.6 0.0016 Cb medulloblastoma GAAACGAGAG 2.3 0.0023 P8 GC+1d culture GAAACGAGAG 4.6 0.0046 P8 GC+1d culture ACAGCCGTGG (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAACGAGAG 14.1 0.0141 P8 GC+SHH+1d culture TTGTCTACCC (2) 3.5 0.0035 P8 GC+SHH+1d culture ACAGCCGTGG (2) 2.3 0.0023 E15 cortex GAAACGAGAG 4.9 0.0049 P1 cortex GAAACGAGAG 4.5 0.0045 Hypothalamus CCCAGCCTTC (5) 1.8 0.0018 Hypothalamus GAAACGAGAG 1.8 0.0018 E12.5 retina GAAACGAGAG 3.8 0.0038 E12.5 retina ACAGCCGTGG (2) 1.9 0.0019 E14.5 retina TTGTCTACCC (2) 1.8 0.0018 E16.5 retina GAAACGAGAG 9.1 0.0091 E18.5 retina ACAGCCGTGG (2) 3.6 0.0036 E18.5 retina GAAACGAGAG 1.8 0.0018 P0.5 retina ACAGCCGTGG (2) 9.8 0.0098 P0.5 retina CCCAGCCTTC (5) 2 0.002 P0.5 retina GAAACGAGAG 2 0.002 P2.5 retina ACAGCCGTGG (2) 3.5 0.0035 P2.5 retina GAAACGAGAG 1.8 0.0018 P4.5 retina GAAACGAGAG 5.9 0.0059 P6.5 retina GAAACGAGAG 8.3 0.0083 P10.5 crx- retina GAAACGAGAG 1.9 0.0019 P10.5 crx+ retina TTGTCTACCC (2) 1.9 0.0019 Adult retinal GAAACGAGAG 3.7 0.0037 ONL CCCAGCCTTC (5) 3.8 0.0038 ONL GAAACGAGAG 3.8 0.0038 ONL ACAGCCGTGG (2) 1.9 0.0019