Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22515	D230050J18Rik	RIKEN cDNA D230050J18 gene	X		319732
Mm.22515	Gpc3	glypican 3	X		14734
Gene Ontology	extracellular matrix | extracellular space | integral to plasma membrane | negative regulation of growth | organogenesis
Human Homolog	GPC3[glypican 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTTTTGAGTT (6) 8.2 0.0082 P8 Cb GC GATTTCTTTG (7) 3.3 0.0033 Cb medulloblastoma CTTTTGAGTT (6) 6.9 0.0069 P8 GC+1d culture GATTTCTTTG (7) 8 0.008 P8 GC+1d culture CTTTTGAGTT (6) 6.8 0.0068 P8 GC+1d culture GAGAAAGTTT (5) 1.1 0.0011 P8 GC+SHH+1d culture CTTTTGAGTT (6) 8.2 0.0082 P8 GC+SHH+1d culture GATTTCTTGG (3) 4.7 0.0047 P8 GC+SHH+1d culture GATTTCTTTG (7) 3.5 0.0035 3T3 fibroblasts CCGTCCCCAC (2) 28 0.028 3T3 fibroblasts TTCCAACAGT (2) 7 0.007 E15 cortex GAGAAAGTTT (5) 4.9 0.0049 P1 cortex TCTGTGCCCA (7) 4.5 0.0045 Hypothalamus CTTTTGAGTT (6) 5.4 0.0054 Hypothalamus GATTTCTTGG (3) 1.8 0.0018 E12.5 retina CTTTTGAGTT (6) 7.5 0.0075 E12.5 retina GATTTCTTTG (7) 3.8 0.0038 E12.5 retina GATTTCTTGG (3) 1.9 0.0019 E14.5 retina GATTTCTTTG (7) 7.3 0.0073 E14.5 retina CTTTTGAGTT (6) 3.6 0.0036 E14.5 retina GATTTCTTGG (3) 1.8 0.0018 E14.5 retina TCTGTGCCCA (7) 1.8 0.0018 E16.5 retina GATTTCTTTG (7) 5.4 0.0054 E16.5 retina CTTTTGAGTT (6) 1.8 0.0018 E18.5 retina CTTTTGAGTT (6) 1.8 0.0018 E18.5 retina GATTTCTTGG (3) 1.8 0.0018 E18.5 retina GATTTCTTTG (7) 1.8 0.0018 E18.5 retina TTCCAACAGT (2) 1.8 0.0018 P0.5 retina GATTTCTTTG (7) 5.9 0.0059 P0.5 retina GATTTCTTGG (3) 3.9 0.0039 P0.5 retina CTTTTGAGTT (6) 2 0.002 P0.5 retina GAGAAAGTTT (5) 2 0.002 P0.5 retina TCTGTGCCCA (7) 2 0.002 P2.5 retina GATTTCTTGG (3) 3.5 0.0035 P2.5 retina GATTTCTTTG (7) 3.5 0.0035 P2.5 retina CCGTCCCCAC (2) 1.8 0.0018 P2.5 retina CTTTTGAGTT (6) 1.8 0.0018 P2.5 retina GAGAAAGTTT (5) 1.8 0.0018 P2.5 retina TCTGTGCCCA (7) 1.8 0.0018 P4.5 retina CTTTTGAGTT (6) 5.9 0.0059 P4.5 retina GATTTCTTTG (7) 2 0.002 P4.5 retina TCTGTGCCCA (7) 2 0.002 P6.5 retina CTTTTGAGTT (6) 6.7 0.0067 P6.5 retina GATTTCTTGG (3) 3.3 0.0033 P6.5 retina GAGAAAGTTT (5) 1.7 0.0017 P6.5 retina GATTTCTTTG (7) 1.7 0.0017 P10.5 crx- retina CTTTTGAGTT (6) 9.3 0.0093 P10.5 crx- retina GATTTCTTGG (3) 5.6 0.0056 P10.5 crx- retina TCTGTGCCCA (7) 3.7 0.0037 P10.5 crx- retina TTCCAACAGT (2) 3.7 0.0037 P10.5 crx+ retina CTTTTGAGTT (6) 3.8 0.0038 P10.5 crx+ retina GATTTCTTTG (7) 3.8 0.0038 P10.5 crx+ retina CCGTCCCCAC (2) 1.9 0.0019 P10.5 crx+ retina TCTGTGCCCA (7) 1.9 0.0019 Adult retinal CTTTTGAGTT (6) 1.9 0.0019 ONL CTTTTGAGTT (6) 11.5 0.0115 ONL GATTTCTTGG (3) 1.9 0.0019 ONL TCTGTGCCCA (7) 1.9 0.0019