Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.225505	Chka	choline kinase alpha	19	19 A (19 3.0 cM)	12660
Gene Ontology	choline kinase activity | kinase activity | transferase activity
Human Homolog	CHKA[choline kinase alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 7 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CACACACACA (106) 11.4 0.0114 P8 Cb GC CACACACATA (15) 1.6 0.0016 P8 Cb GC TACATTAATA 1.6 0.0016 Cb medulloblastoma CACACACACA (106) 32.4 0.0324 Cb medulloblastoma CACACACATA (15) 2.3 0.0023 Cb medulloblastoma CACCCAAAAA (3) 2.3 0.0023 Cb medulloblastoma GGATAAACTT (2) 2.3 0.0023 P8 GC+1d culture CACACACACA (106) 6.8 0.0068 P8 GC+1d culture TACATTAATA 3.4 0.0034 P8 GC+SHH+1d culture CACACACACA (106) 9.4 0.0094 P8 GC+SHH+1d culture GGATAAACTT (2) 1.2 0.0012 3T3 fibroblasts CACACACACA (106) 17.5 0.0175 E15 cortex CACACACACA (106) 4.9 0.0049 P1 cortex CACACACACA (106) 27.3 0.0273 P1 cortex TACATTAATA 4.5 0.0045 Hypothalamus CACACACACA (106) 96 0.096 Hypothalamus CACACACATA (15) 1.8 0.0018 Hypothalamus CACCCAAAAA (3) 1.8 0.0018 Hypothalamus TACATTAATA 1.8 0.0018 E12.5 retina CACACACACA (106) 3.8 0.0038 E12.5 retina CACACACATA (15) 1.9 0.0019 E12.5 retina TACATTAATA 1.9 0.0019 E14.5 retina CACACACACA (106) 18.2 0.0182 E16.5 retina CACACACACA (106) 12.7 0.0127 E16.5 retina TACATTAATA 1.8 0.0018 E18.5 retina CACACACACA (106) 5.5 0.0055 E18.5 retina TACATTAATA 3.6 0.0036 E18.5 retina CACACACATA (15) 1.8 0.0018 P0.5 retina CACACACACA (106) 7.9 0.0079 P0.5 retina TACATTAATA 3.9 0.0039 P2.5 retina CACACACACA (106) 21.1 0.0211 P2.5 retina GGATAAACTT (2) 1.8 0.0018 P2.5 retina TACATTAATA 1.8 0.0018 P4.5 retina CACACACACA (106) 7.9 0.0079 P4.5 retina TACATTAATA 4 0.004 P4.5 retina CACCCAAAAA (3) 2 0.002 P6.5 retina CACACACACA (106) 8.3 0.0083 P6.5 retina CACACACATA (15) 1.7 0.0017 P10.5 crx- retina CACACACACA (106) 5.6 0.0056 P10.5 crx- retina TACATTAATA 1.9 0.0019 P10.5 crx+ retina CACACACACA (106) 7.7 0.0077 P10.5 crx+ retina TACATTAATA 1.9 0.0019 Adult retinal CACACACACA (106) 16.7 0.0167 Adult retinal CACACACATA (15) 3.7 0.0037 Adult retinal TACATTAATA 1.9 0.0019 ONL CACACACACA (106) 21.1 0.0211 ONL CACACACATA (15) 5.7 0.0057