Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22584	Strap	serine/threonine kinase receptor associated protein	6		20901
Gene Ontology	kinase activity | negative regulation of transcription from Pol II promoter | negative regulation of transforming growth factor beta receptor signaling pathway | protein binding | receptor activity | receptor binding
Human Homolog	STRAP[serine/threonine kinase receptor associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 86 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAAAGTAAC 8.2 0.0082 P8 Cb GC ATTTAATGAA (3) 3.3 0.0033 P8 Cb GC TATCAAGATT 3.3 0.0033 P8 Cb GC AACATATGGT 1.6 0.0016 Cb medulloblastoma ATAAAGTAAC 6.9 0.0069 Cb medulloblastoma AAGAAGAAAA (14) 2.3 0.0023 Cb medulloblastoma ATTTAATGAA (3) 2.3 0.0023 Cb medulloblastoma GACAGGGGAA (3) 2.3 0.0023 Cb medulloblastoma GTAAAATAAG 2.3 0.0023 Cb medulloblastoma TATCAAGATT 2.3 0.0023 Cb medulloblastoma TATTTCCTCC 2.3 0.0023 P8 GC+1d culture ATAAAGTAAC 4.6 0.0046 P8 GC+1d culture TATCAAGATT 4.6 0.0046 P8 GC+1d culture TTTAAAGAGA (3) 3.4 0.0034 P8 GC+1d culture AAGAAGAAAA (14) 1.1 0.0011 P8 GC+1d culture GACAGGGGAA (3) 1.1 0.0011 P8 GC+SHH+1d culture ATAAAGTAAC 4.7 0.0047 P8 GC+SHH+1d culture TATCAAGATT 4.7 0.0047 P8 GC+SHH+1d culture ATTTAATGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GACAGGGGAA (3) 1.2 0.0012 P8 GC+SHH+1d culture TTTAAAGAGA (3) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex GTAAAATAAG 4.5 0.0045 P1 cortex TATCAAGATT 4.5 0.0045 P1 cortex TTTAAAGAGA (3) 4.5 0.0045 Hypothalamus TATCAAGATT 9.1 0.0091 Hypothalamus ACAGAAAGTG (9) 3.6 0.0036 Hypothalamus ATAAAGTAAC 3.6 0.0036 Hypothalamus ATTTAATGAA (3) 1.8 0.0018 Hypothalamus GACAGGGGAA (3) 1.8 0.0018 Hypothalamus TATTTCCTCC 1.8 0.0018 E12.5 retina ATAAAGTAAC 11.3 0.0113 E12.5 retina TATCAAGATT 11.3 0.0113 E12.5 retina GACAGGGGAA (3) 1.9 0.0019 E14.5 retina TATCAAGATT 16.4 0.0164 E14.5 retina GACAGGGGAA (3) 5.5 0.0055 E14.5 retina ATAAAGTAAC 3.6 0.0036 E14.5 retina ATTTAATGAA (3) 3.6 0.0036 E14.5 retina GTAAAATAAG 1.8 0.0018 E16.5 retina ATAAAGTAAC 9.1 0.0091 E16.5 retina TATCAAGATT 9.1 0.0091 E16.5 retina AAGAAGAAAA (14) 1.8 0.0018 E16.5 retina ATTTAATGAA (3) 1.8 0.0018 E16.5 retina CTCCGCCAGG (2) 1.8 0.0018 E18.5 retina TATCAAGATT 10.9 0.0109 E18.5 retina ATAAAGTAAC 9.1 0.0091 P0.5 retina ATAAAGTAAC 7.9 0.0079 P0.5 retina TATCAAGATT 5.9 0.0059 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ATTTAATGAA (3) 2 0.002 P2.5 retina TATCAAGATT 12.3 0.0123 P2.5 retina GACAGGGGAA (3) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina TTTAAAGAGA (3) 1.8 0.0018 P4.5 retina TATCAAGATT 5.9 0.0059 P4.5 retina ACAGAAAGTG (9) 2 0.002 P4.5 retina ATAAAGTAAC 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TTTAAAGAGA (3) 8.3 0.0083 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina TATCAAGATT 3.3 0.0033 P6.5 retina ATAAAGTAAC 1.7 0.0017 P6.5 retina CTCCGCCAGG (2) 1.7 0.0017 P6.5 retina GACAGGGGAA (3) 1.7 0.0017 P6.5 retina TATTTCCTCC 1.7 0.0017 P10.5 crx- retina ATAAAGTAAC 7.4 0.0074 P10.5 crx- retina AACATATGGT 5.6 0.0056 P10.5 crx- retina AAGAAGAAAA (14) 1.9 0.0019 P10.5 crx- retina ACAGAAAGTG (9) 1.9 0.0019 P10.5 crx- retina ATTTAATGAA (3) 1.9 0.0019 P10.5 crx- retina CTCCGCCAGG (2) 1.9 0.0019 P10.5 crx- retina TTTAAAGAGA (3) 1.9 0.0019 P10.5 crx+ retina TATCAAGATT 17.3 0.0173 P10.5 crx+ retina ATAAAGTAAC 1.9 0.0019 Adult retinal TATCAAGATT 3.7 0.0037 Adult retinal ATAAAGTAAC 1.9 0.0019 Adult retinal GACAGGGGAA (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TTTAAAGAGA (3) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TATCAAGATT 5.7 0.0057 ONL TTTAAAGAGA (3) 5.7 0.0057 ONL AAGAAGAAAA (14) 1.9 0.0019 ONL ATAAAGTAAC 1.9 0.0019 ONL GACAGGGGAA (3) 1.9 0.0019