Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22596	Tsta3	tissue specific transplantation antigen P35B	15	15 47.4 cM	22122
Gene Ontology	catalytic activity | isomerase activity | oxidoreductase activity
Human Homolog	TSTA3[tissue specific transplantation antigen P35B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 100 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC TGGGTGCTGG (64) 8.2 0.0082 P8 Cb GC GACTTCAATG (5) 1.6 0.0016 P8 Cb GC TGGCACTGTG (3) 1.6 0.0016 P8 Cb GC TGTCCCTGCT (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TGGGTGCTGG (64) 9.2 0.0092 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TGGCACTGTG (3) 8 0.008 P8 GC+1d culture TGGGTGCTGG (64) 5.7 0.0057 P8 GC+1d culture ACTTCAATGG (2) 1.1 0.0011 P8 GC+1d culture TGTCCCTGCT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TGGCACTGTG (3) 5.9 0.0059 P8 GC+SHH+1d culture TGGGTGCTGG (64) 3.5 0.0035 P8 GC+SHH+1d culture ACTTCAATGG (2) 1.2 0.0012 P8 GC+SHH+1d culture GACTTCAATG (5) 1.2 0.0012 P8 GC+SHH+1d culture TGTCCCTGCT (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGGGTGCTGG (64) 17.5 0.0175 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex TGGGTGCTGG (64) 14.8 0.0148 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex TGGGTGCTGG (64) 13.6 0.0136 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus TGGGTGCTGG (64) 9.1 0.0091 Hypothalamus TGGCACTGTG (3) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina TGGGTGCTGG (64) 9.4 0.0094 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGGGTGCTGG (64) 54.7 0.0547 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina TGTCCCTGCT (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGGGTGCTGG (64) 41.7 0.0417 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina TGGCACTGTG (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TGGGTGCTGG (64) 20 0.02 E18.5 retina TGGCACTGTG (3) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina TGGGTGCTGG (64) 11.8 0.0118 P0.5 retina TGGCACTGTG (3) 5.9 0.0059 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGGGTGCTGG (64) 17.6 0.0176 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TGGGTGCTGG (64) 9.9 0.0099 P4.5 retina GACTTCAATG (5) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina TGGGTGCTGG (64) 13.3 0.0133 P6.5 retina TGGCACTGTG (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina TGGGTGCTGG (64) 20.4 0.0204 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina TGTCCCTGCT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina TGGGTGCTGG (64) 15.4 0.0154 P10.5 crx+ retina TGTCCCTGCT (2) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal TGGGTGCTGG (64) 13 0.013 Adult retinal ACTTCAATGG (2) 1.9 0.0019 Adult retinal TGGCACTGTG (3) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TGGGTGCTGG (64) 40.2 0.0402 ONL GAAAAAAAAA (204) 24.9 0.0249