Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2261
Psmd4
proteasome (prosome, macropain) 26S subunit, non-ATPase, 4
3
3 50.0 cM
19185
Mm.2261
1700123N01Rik
RIKEN cDNA 1700123N01 gene
3
76641
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 56 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGCTCTGG
(
7
)
9.8
0.0098
P8 Cb GC
TTTTTTTTTT (
433
)
4.9
0.0049
Cb medulloblastoma
GGGGCTCTGG
(
7
)
11.6
0.0116
Cb medulloblastoma
GAGGTTCTGG
(
5
)
2.3
0.0023
Cb medulloblastoma
TTTTTTTTTT (
433
)
2.3
0.0023
P8 GC+1d culture
TTTTTTTTTT (
433
)
13.7
0.0137
P8 GC+1d culture
GGGGCTCTGG
(
7
)
6.8
0.0068
P8 GC+1d culture
GGGGATCTGG (
6
)
5.7
0.0057
P8 GC+1d culture
GCCACCAAGG
(
4
)
2.3
0.0023
P8 GC+1d culture
CGGAACGGAG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
GGGGCTCTGG
(
7
)
11.7
0.0117
P8 GC+SHH+1d culture
TTTTTTTTTT (
433
)
5.9
0.0059
P8 GC+SHH+1d culture
GAGGTTCTGG
(
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCACCAAGG
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GGGGATCTGG (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTTGCGGTGA (
7
)
1.2
0.0012
3T3 fibroblasts
GGGGCTCTGG
(
7
)
35
0.035
E15 cortex
GGGGCTCTGG
(
7
)
29.7
0.0297
E15 cortex
CGGAACGGAG
(
2
)
4.9
0.0049
E15 cortex
GTTGCGGTGA (
7
)
4.9
0.0049
E15 cortex
TTTTTTTTTT (
433
)
4.9
0.0049
P1 cortex
GGGGCTCTGG
(
7
)
9.1
0.0091
P1 cortex
TTTTTTTTTT (
433
)
4.5
0.0045
Hypothalamus
GGGGCTCTGG
(
7
)
10.9
0.0109
Hypothalamus
TTTTTTTTTT (
433
)
7.2
0.0072
Hypothalamus
GCCACCAAGG
(
4
)
1.8
0.0018
E12.5 retina
TTTTTTTTTT (
433
)
7.5
0.0075
E12.5 retina
GGGGCTCTGG
(
7
)
5.6
0.0056
E14.5 retina
TTTTTTTTTT (
433
)
23.7
0.0237
E14.5 retina
GCCACCAAGG
(
4
)
1.8
0.0018
E14.5 retina
GGGGCTCTGG
(
7
)
1.8
0.0018
E16.5 retina
TTTTTTTTTT (
433
)
5.4
0.0054
E18.5 retina
GGGGCTCTGG
(
7
)
10.9
0.0109
E18.5 retina
TTTTTTTTTT (
433
)
10.9
0.0109
E18.5 retina
GAGGTTCTGG
(
5
)
3.6
0.0036
P0.5 retina
TTTTTTTTTT (
433
)
9.8
0.0098
P0.5 retina
GGGGCTCTGG
(
7
)
7.9
0.0079
P0.5 retina
GGGGATCTGG (
6
)
2
0.002
P2.5 retina
GGGGCTCTGG
(
7
)
7
0.007
P2.5 retina
TTTTTTTTTT (
433
)
7
0.007
P2.5 retina
GTTGCGGTGA (
7
)
1.8
0.0018
P4.5 retina
GGGGCTCTGG
(
7
)
9.9
0.0099
P4.5 retina
TTTTTTTTTT (
433
)
9.9
0.0099
P4.5 retina
GGGGATCTGG (
6
)
2
0.002
P6.5 retina
TTTTTTTTTT (
433
)
8.3
0.0083
P6.5 retina
GGGGCTCTGG
(
7
)
6.7
0.0067
P6.5 retina
GAGGTTCTGG
(
5
)
1.7
0.0017
P6.5 retina
GGGGATCTGG (
6
)
1.7
0.0017
P6.5 retina
GTTGCGGTGA (
7
)
1.7
0.0017
P10.5 crx- retina
GGGGCTCTGG
(
7
)
9.3
0.0093
P10.5 crx+ retina
GGGGCTCTGG
(
7
)
17.3
0.0173
P10.5 crx+ retina
TTTTTTTTTT (
433
)
3.8
0.0038
Adult retinal
GGGGCTCTGG
(
7
)
14.8
0.0148
Adult retinal
TTTTTTTTTT (
433
)
7.4
0.0074
ONL
GGGGCTCTGG
(
7
)
19.2
0.0192
ONL
TTTTTTTTTT (
433
)
3.8
0.0038
