Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.226820
2010013E08Rik
RIKEN cDNA 2010013E08 gene
4
69876
Mm.226820
2210418H06Rik
RIKEN cDNA 2210418H06 gene
4
70159
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 44 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGATGGATG (
5
)
8.2
0.0082
Cb medulloblastoma
TGGGCCGCCC (
3
)
4.6
0.0046
Cb medulloblastoma
GGGATGGATG (
5
)
2.3
0.0023
P8 GC+1d culture
GGGATGGATG (
5
)
13.7
0.0137
P8 GC+SHH+1d culture
GGGATGGATG (
5
)
12.9
0.0129
P8 GC+SHH+1d culture
CAGAGCACAC
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGCCGCCTG
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGGCCGCCC (
3
)
1.2
0.0012
3T3 fibroblasts
GGGATGGATG (
5
)
3.5
0.0035
3T3 fibroblasts
TGGCCGCCTG
(
3
)
3.5
0.0035
E15 cortex
GGGATGGATG (
5
)
9.9
0.0099
P1 cortex
TGGGCCGCCC (
3
)
9.1
0.0091
P1 cortex
TGGCCGCCTG
(
3
)
4.5
0.0045
Hypothalamus
TGGGCCGCCC (
3
)
7.2
0.0072
Hypothalamus
GGGATGGATG (
5
)
3.6
0.0036
Hypothalamus
TGGCCGCCTG
(
3
)
1.8
0.0018
E12.5 retina
GGGATGGATG (
5
)
20.7
0.0207
E12.5 retina
CAGAGCACAC
(
4
)
1.9
0.0019
E12.5 retina
TGGGCCGCCC (
3
)
1.9
0.0019
E14.5 retina
GGGATGGATG (
5
)
7.3
0.0073
E14.5 retina
TGGGCCGCCC (
3
)
1.8
0.0018
E16.5 retina
GGGATGGATG (
5
)
14.5
0.0145
E18.5 retina
GGGATGGATG (
5
)
9.1
0.0091
E18.5 retina
TGGGCCGCCC (
3
)
3.6
0.0036
E18.5 retina
CAGAGCACAC
(
4
)
1.8
0.0018
P0.5 retina
GGGATGGATG (
5
)
5.9
0.0059
P0.5 retina
CAGAGCACAC
(
4
)
3.9
0.0039
P0.5 retina
TGGGCCGCCC (
3
)
3.9
0.0039
P2.5 retina
GGGATGGATG (
5
)
8.8
0.0088
P2.5 retina
TGGGCCGCCC (
3
)
5.3
0.0053
P4.5 retina
GGGATGGATG (
5
)
39.6
0.0396
P4.5 retina
TGGCCGCCTG
(
3
)
2
0.002
P4.5 retina
TGGGCCGCCC (
3
)
2
0.002
P6.5 retina
GGGATGGATG (
5
)
26.7
0.0267
P6.5 retina
TGGGCCGCCC (
3
)
1.7
0.0017
P10.5 crx- retina
TGGGCCGCCC (
3
)
7.4
0.0074
P10.5 crx- retina
GGGATGGATG (
5
)
5.6
0.0056
P10.5 crx- retina
TGGCCGCCTG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGGATGGATG (
5
)
11.5
0.0115
P10.5 crx+ retina
TGGGCCGCCC (
3
)
7.7
0.0077
Adult retinal
GGGATGGATG (
5
)
9.3
0.0093
Adult retinal
TGGGCCGCCC (
3
)
9.3
0.0093
Adult retinal
TGGCCGCCTG
(
3
)
1.9
0.0019
ONL
GGGATGGATG (
5
)
1.9
0.0019
