Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22699	Sepp1	selenoprotein P, plasma, 1	15	15 5.9 cM	20363
Gene Ontology	brain development | extracellular | extracellular space | growth | locomotory behavior | post-embryonic development | selenium binding | sexual reproduction
Human Homolog	SEPP1[selenoprotein P, plasma, 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 142 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGTGCAACT (2) 17.9 0.0179 P8 Cb GC TATCTGTGCA 17.9 0.0179 P8 Cb GC GAAGCCAACC (5) 4.9 0.0049 P8 Cb GC AAATAAAGAG (2) 3.3 0.0033 P8 Cb GC GAATATGGAA (2) 3.3 0.0033 P8 Cb GC AAGAGAACAA (2) 1.6 0.0016 P8 Cb GC GGGCAGGGAG (4) 1.6 0.0016 P8 Cb GC TATGTGTGCA (7) 1.6 0.0016 Cb medulloblastoma CAGTGCAACT (2) 13.9 0.0139 Cb medulloblastoma TATCTGTGCA 11.6 0.0116 Cb medulloblastoma GGGCAGGGGA (5) 9.2 0.0092 Cb medulloblastoma AAGAGAACAA (2) 4.6 0.0046 Cb medulloblastoma GAATTAGAAA (5) 2.3 0.0023 Cb medulloblastoma GGGCAGGGAG (4) 2.3 0.0023 Cb medulloblastoma TATGTGTGCA (7) 2.3 0.0023 P8 GC+1d culture GAATATGGAA (2) 4.6 0.0046 P8 GC+1d culture AAGAGAACAA (2) 2.3 0.0023 P8 GC+1d culture GAAATAATTT (4) 2.3 0.0023 P8 GC+1d culture GGGCAGGGAG (4) 2.3 0.0023 P8 GC+1d culture TATCTGTGCA 2.3 0.0023 P8 GC+1d culture ATGGAAGGAA (7) 1.1 0.0011 P8 GC+1d culture CAGTGCAACT (2) 1.1 0.0011 P8 GC+1d culture GAAGCCAACC (5) 1.1 0.0011 P8 GC+1d culture GGGCAGGGGA (5) 1.1 0.0011 P8 GC+1d culture TGGTTAACCA (4) 1.1 0.0011 P8 GC+1d culture TTTCTGGCTC (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGCAGGGAG (4) 5.9 0.0059 P8 GC+SHH+1d culture GGCAGGAGCT (6) 2.3 0.0023 P8 GC+SHH+1d culture AAGAGAACAA (2) 1.2 0.0012 P8 GC+SHH+1d culture AGCAGGAGCA (3) 1.2 0.0012 P8 GC+SHH+1d culture CTGACAGTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GAAGCCAACC (5) 1.2 0.0012 P8 GC+SHH+1d culture GAATATGGAA (2) 1.2 0.0012 3T3 fibroblasts CTGACAGTGG (3) 7 0.007 3T3 fibroblasts CAGTGCAACT (2) 3.5 0.0035 3T3 fibroblasts GGGCAGGGAG (4) 3.5 0.0035 3T3 fibroblasts TATCTGTGCA 3.5 0.0035 E15 cortex GGGCAGGGAG (4) 4.9 0.0049 P1 cortex TATGTGTGCA (7) 4.5 0.0045 Hypothalamus GGGCAGGGGA (5) 30.8 0.0308 Hypothalamus CAGTGCAACT (2) 23.5 0.0235 Hypothalamus TATCTGTGCA 9.1 0.0091 Hypothalamus GAAGCCAACC (5) 7.2 0.0072 Hypothalamus CTGACAGTGG (3) 3.6 0.0036 Hypothalamus TATGTGTGCA (7) 3.6 0.0036 Hypothalamus AAGAGAACAA (2) 1.8 0.0018 Hypothalamus GAAATAATTT (4) 1.8 0.0018 Hypothalamus GGCAGGAGCT (6) 1.8 0.0018 Hypothalamus TGGTTAACCA (4) 1.8 0.0018 Hypothalamus TTTCTGGCTC (2) 1.8 0.0018 E12.5 retina AAATAAAGAG (2) 3.8 0.0038 E12.5 retina GAATATGGAA (2) 3.8 0.0038 E12.5 retina TATGTGTGCA (7) 3.8 0.0038 E12.5 retina AAGAGAACAA (2) 1.9 0.0019 E12.5 retina AGCAGGAGCA (3) 1.9 0.0019 E12.5 retina ATGGAAGGAA (7) 1.9 0.0019 E12.5 retina GAAACCAAGA (5) 1.9 0.0019 E12.5 retina GGGCAGGGAG (4) 1.9 0.0019 E12.5 retina GGTTTAGAAT (5) 1.9 0.0019 E14.5 retina GGCAGGAGCT (6) 7.3 0.0073 E14.5 retina GAAATAATTT (4) 3.6 0.0036 E14.5 retina GAATATGGAA (2) 3.6 0.0036 E14.5 retina TGTGGAGGTT 3.6 0.0036 E14.5 retina AAATAAAGAG (2) 1.8 0.0018 E14.5 retina AAGAGAACAA (2) 1.8 0.0018 E14.5 retina AGCAGGAGCA (3) 1.8 0.0018 E14.5 retina ATGGAAGGAA (7) 1.8 0.0018 E14.5 retina GGGCAGGGAG (4) 1.8 0.0018 E14.5 retina GGGCAGGGGA (5) 1.8 0.0018 E14.5 retina TATGTGTGCA (7) 1.8 0.0018 E16.5 retina GGCAGGAGCT (6) 3.6 0.0036 E16.5 retina GGGCAGGGAG (4) 3.6 0.0036 E16.5 retina AGCAGGAGCA (3) 1.8 0.0018 E16.5 retina GAATTAGAAA (5) 1.8 0.0018 E16.5 retina GGGCAGGGGA (5) 1.8 0.0018 E16.5 retina TATGTGTGCA (7) 1.8 0.0018 E16.5 retina TGTGGAGGTT 1.8 0.0018 E18.5 retina AAATAAAGAG (2) 3.6 0.0036 E18.5 retina GGGCAGGGGA (5) 3.6 0.0036 E18.5 retina AAGAGAACAA (2) 1.8 0.0018 E18.5 retina GGGCAGGGAG (4) 1.8 0.0018 E18.5 retina TATGTGTGCA (7) 1.8 0.0018 P0.5 retina GAATATGGAA (2) 3.9 0.0039 P0.5 retina GGGCAGAGCA (2) 3.9 0.0039 P0.5 retina TATGTGTGCA (7) 3.9 0.0039 P0.5 retina GAAATAATTT (4) 2 0.002 P0.5 retina GAATTAGAAA (5) 2 0.002 P0.5 retina GGGCAGGGAG (4) 2 0.002 P0.5 retina TATCTGTGCA 2 0.002 P2.5 retina GGGCAGGGGA (5) 5.3 0.0053 P2.5 retina TATGTGTGCA (7) 3.5 0.0035 P2.5 retina AAATAAAGAG (2) 1.8 0.0018 P2.5 retina AAGAGAACAA (2) 1.8 0.0018 P2.5 retina AGCAGGAGCA (3) 1.8 0.0018 P2.5 retina GAAATAATTT (4) 1.8 0.0018 P2.5 retina GAATATGGAA (2) 1.8 0.0018 P4.5 retina GAAATAATTT (4) 5.9 0.0059 P4.5 retina GGGCAGGGGA (5) 4 0.004 P4.5 retina AAATAAAGAG (2) 2 0.002 P4.5 retina TATGTGTGCA (7) 2 0.002 P6.5 retina AAGAGAACAA (2) 5 0.005 P6.5 retina GGGCAGGGGA (5) 5 0.005 P6.5 retina GAAATAATTT (4) 3.3 0.0033 P6.5 retina AAATAAAGAG (2) 1.7 0.0017 P6.5 retina CAGTGCAACT (2) 1.7 0.0017 P6.5 retina CTGACAGTGG (3) 1.7 0.0017 P6.5 retina TATCTGTGCA 1.7 0.0017 P10.5 crx- retina GAATATGGAA (2) 5.6 0.0056 P10.5 crx- retina GGGCAGGGAG (4) 5.6 0.0056 P10.5 crx- retina GGCAGGAGCT (6) 3.7 0.0037 P10.5 crx- retina AAGAGAACAA (2) 1.9 0.0019 P10.5 crx- retina GAAACCAAGA (5) 1.9 0.0019 P10.5 crx- retina GAAATAATTT (4) 1.9 0.0019 P10.5 crx- retina GGGCAGGGGA (5) 1.9 0.0019 P10.5 crx- retina GGTTTAGAAT (5) 1.9 0.0019 P10.5 crx- retina TATGTGTGCA (7) 1.9 0.0019 P10.5 crx+ retina GGGCAGGGAG (4) 7.7 0.0077 P10.5 crx+ retina AGCAGGAGCA (3) 3.8 0.0038 P10.5 crx+ retina AAATAAAGAG (2) 1.9 0.0019 P10.5 crx+ retina ATGGAAGGAA (7) 1.9 0.0019 P10.5 crx+ retina CAGTGCAACT (2) 1.9 0.0019 P10.5 crx+ retina GAATATGGAA (2) 1.9 0.0019 P10.5 crx+ retina GGCAGGAGCT (6) 1.9 0.0019 P10.5 crx+ retina GGGCAGGGGA (5) 1.9 0.0019 P10.5 crx+ retina GGTTTAGAAT (5) 1.9 0.0019 P10.5 crx+ retina TATCTGTGCA 1.9 0.0019 P10.5 crx+ retina TATGTGTGCA (7) 1.9 0.0019 P10.5 crx+ retina TGGTTAACCA (4) 1.9 0.0019 Adult retinal GGGCAGGGAG (4) 22.2 0.0222 Adult retinal GGGCAGGGGA (5) 7.4 0.0074 Adult retinal GAAGCCAACC (5) 1.9 0.0019 Adult retinal GAATATGGAA (2) 1.9 0.0019 Adult retinal TATCTGTGCA 1.9 0.0019 Adult retinal TATGTGTGCA (7) 1.9 0.0019 Adult retinal TTTCTGGCTC (2) 1.9 0.0019 ONL GGGCAGGGAG (4) 7.7 0.0077 ONL AGCAGGAGCA (3) 1.9 0.0019 ONL GAAACCAAGA (5) 1.9 0.0019 ONL GAATATGGAA (2) 1.9 0.0019 ONL GGGCAGAGCA (2) 1.9 0.0019 ONL TGTGGAGGTT 1.9 0.0019 ONL TTTCTGGCTC (2) 1.9 0.0019