| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCAGTGTCA (3) GTCTCCACTG (3) TTATCCTTTG (2)
| 9.7 | 0.0097 |
| Cb medulloblastoma | GAGGAAGCAA (2) TGGCACAGGC (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GCCTGGTGAA (2) GTCTCCACTG (3) GTTGGGGGAG (2) TTATCCTTTG (2)
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | GAGGAAGCAA (2) GCCAGTGTCA (3) GCCTGGTGAA (2) TTATCCTTTG (2)
| 12.9 | 0.0129 |
| 3T3 fibroblasts | GCCAGTGTCA (3) GCCTGGTGAA (2) TTATCCTTTG (2)
| 14 | 0.014 |
| E12.5 retina | GTTGGGGGAG (2) TTATCCTTTG (2) TTTTCCTTTG (2)
| 13.2 | 0.0132 |
| E14.5 retina | GCCAGTGTCA (3) TTATCCTTTG (2)
| 16.4 | 0.0164 |
| E16.5 retina | GAGGAAGCAA (2) GCCAGTGTCA (3) TTATCCTTTG (2)
| 12.6 | 0.0126 |
| E18.5 retina | TTATCCTTTG (2)
| 7.3 | 0.0073 |
| P0.5 retina | GCCAGTGTCA (3) GTTGGGGGAG (2) TTATCCTTTG (2)
| 19.7 | 0.0197 |
| P2.5 retina | GCCAGTGTCA (3) TTATCCTTTG (2) TTTTCCTTTG (2)
| 15.9 | 0.0159 |
| P4.5 retina | TTATCCTTTG (2)
| 4 | 0.004 |
| P6.5 retina | GTTGGGGGAG (2) TTATCCTTTG (2)
| 6.7 | 0.0067 |
| P10.5 crx- retina | GCCAGTGTCA (3) TTATCCTTTG (2) TTTTCCTTTG (2)
| 13 | 0.013 |
| P10.5 crx+ retina | GCCAGTGTCA (3) GCCTGGTGAA (2) GTCTCCACTG (3) GTTGGGGGAG (2) TGGCACAGGC (2)
| 13.3 | 0.0133 |
| Adult retinal | GAGGAAGCAA (2) GTCTCCACTG (3)
| 3.8 | 0.0038 |
| ONL | GCCAGTGTCA (3) TTATCCTTTG (2)
| 9.5 | 0.0095 |