Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22723	Rpl23a	ribosomal protein L23a	11		268449
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	RPL23A[ribosomal protein L23a]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGAAAATAG 42.4 0.0424 P8 Cb GC GCTGACTCCG (2) 9.8 0.0098 P8 Cb GC AGGAAAATAG 1.6 0.0016 P8 Cb GC GTGGATGTCA (3) 1.6 0.0016 Cb medulloblastoma AAGAAAATAG 16.2 0.0162 Cb medulloblastoma GCTGACTCCG (2) 6.9 0.0069 Cb medulloblastoma GTGGATGTCA (3) 2.3 0.0023 P8 GC+1d culture AAGAAAATAG 40 0.04 P8 GC+1d culture GCTGACTCCG (2) 2.3 0.0023 P8 GC+1d culture AAGAAAATAC (3) 1.1 0.0011 P8 GC+1d culture GGCTGGTTCC 1.1 0.0011 P8 GC+1d culture GTGGATGTCA (3) 1.1 0.0011 P8 GC+SHH+1d culture AAGAAAATAG 43.3 0.0433 P8 GC+SHH+1d culture GCTGACTCCG (2) 4.7 0.0047 P8 GC+SHH+1d culture GGCTGGTTCC 1.2 0.0012 P8 GC+SHH+1d culture GTGGATGTCA (3) 1.2 0.0012 3T3 fibroblasts AAGAAAATAG 17.5 0.0175 3T3 fibroblasts GCTGACTCCG (2) 7 0.007 E15 cortex AAGAAAATAG 14.8 0.0148 E15 cortex GTGGATGTCA (3) 4.9 0.0049 P1 cortex AAGAAAATAG 59.1 0.0591 P1 cortex GTGGATGTCA (3) 9.1 0.0091 P1 cortex AAGAAAATAC (3) 4.5 0.0045 P1 cortex GCTGACTCCG (2) 4.5 0.0045 Hypothalamus AAGAAAATAG 18.1 0.0181 Hypothalamus GTGGATGTCA (3) 1.8 0.0018 E12.5 retina AAGAAAATAG 31.9 0.0319 E12.5 retina GCTGACTCCG (2) 7.5 0.0075 E12.5 retina GTGGATGTCA (3) 1.9 0.0019 E14.5 retina AAGAAAATAG 32.8 0.0328 E14.5 retina GCTGACTCCG (2) 5.5 0.0055 E16.5 retina AAGAAAATAG 38 0.038 E16.5 retina GCTGACTCCG (2) 7.2 0.0072 E18.5 retina AAGAAAATAG 25.5 0.0255 E18.5 retina GCTGACTCCG (2) 10.9 0.0109 E18.5 retina AGGAAAATAG 1.8 0.0018 E18.5 retina GTGGATGTCA (3) 1.8 0.0018 P0.5 retina AAGAAAATAG 33.4 0.0334 P0.5 retina AAGAAAATAC (3) 2 0.002 P0.5 retina AGGAAAATAG 2 0.002 P0.5 retina GCTGACTCCG (2) 2 0.002 P2.5 retina AAGAAAATAG 29.9 0.0299 P2.5 retina GCTGACTCCG (2) 5.3 0.0053 P4.5 retina AAGAAAATAG 25.8 0.0258 P4.5 retina GTGGATGTCA (3) 2 0.002 P6.5 retina AAGAAAATAG 8.3 0.0083 P6.5 retina GCTGACTCCG (2) 5 0.005 P10.5 crx- retina AAGAAAATAG 137.5 0.1375 P10.5 crx- retina GCTGACTCCG (2) 7.4 0.0074 P10.5 crx+ retina AAGAAAATAG 21.1 0.0211 P10.5 crx+ retina GCTGACTCCG (2) 5.8 0.0058 Adult retinal AAGAAAATAG 1.9 0.0019 Adult retinal GCTGACTCCG (2) 1.9 0.0019 Adult retinal GGCTGGTTCC 1.9 0.0019 ONL AAGAAAATAG 13.4 0.0134 ONL AAGAAAATAC (3) 1.9 0.0019