| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGTCAGCAA (2) TATGAAAGAA (3)
| 14.7 | 0.0147 |
| Cb medulloblastoma | TTGGGTGGGT (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | GAGTCAGCAA (2) TATGAAAGAA (3) TTGGGTGGGT (2)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | GAGTCAGCAA (2) TATGAAAGAA (3)
| 8.2 | 0.0082 |
| 3T3 fibroblasts | GAGTCAGCAA (2)
| 17.5 | 0.0175 |
| E15 cortex | CCTGCAGAAA (2) GAGTCAGCAA (2)
| 14.8 | 0.0148 |
| E12.5 retina | GAGTCAGCAA (2)
| 7.5 | 0.0075 |
| E14.5 retina | TATGAAAGAA (3)
| 7.3 | 0.0073 |
| E16.5 retina | CCTGCAGAAA (2) GAGTCAGCAA (2) TATGAAAGAA (3)
| 7.2 | 0.0072 |
| E18.5 retina | CCTGCAGAAA (2) GAGTCAGCAA (2) TATGAAAGAA (3)
| 20 | 0.02 |
| P0.5 retina | GAGTCAGCAA (2) TATGAAAGAA (3)
| 7.9 | 0.0079 |
| P2.5 retina | GAGTCAGCAA (2)
| 7 | 0.007 |
| P4.5 retina | GAGTCAGCAA (2) TATGAAAGAA (3)
| 4 | 0.004 |
| P10.5 crx+ retina | GAGTCAGCAA (2)
| 1.9 | 0.0019 |
| ONL | GAGTCAGCAA (2)
| 1.9 | 0.0019 |