| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TAGCTTCCTC (4)
| 26.1 | 0.0261 |
| Cb medulloblastoma | TAGCTTCCTC (4)
| 53.2 | 0.0532 |
| P8 GC+1d culture | AATTCTCCAT (4) GGGACTCCTC (3) TAGCTTCCTC (4) TCCAAAAGCT (2)
| 103.8 | 0.1038 |
| P8 GC+SHH+1d culture | AGGAGAGTTT (4) TAGCTTCCTC (4) TCCAAAAGCT (2)
| 60.9 | 0.0609 |
| 3T3 fibroblasts | GGGACTCCTC (3) TAGCTTCCTC (4) TAGCTTCCTT (2)
| 17.5 | 0.0175 |
| E15 cortex | TAGCTTCCTC (4)
| 9.9 | 0.0099 |
| P1 cortex | TAGCTTCCTC (4)
| 22.7 | 0.0227 |
| Hypothalamus | AATTCTCCAT (4) TAGCTTCCTC (4) TAGCTTCCTT (2) TCCAAAAGCT (2)
| 74.2 | 0.0742 |
| E12.5 retina | AGGAGAGTTT (4) TAGCTTCCTC (4)
| 11.3 | 0.0113 |
| E14.5 retina | TAGCTTCCTC (4) TCCAAAAGCT (2)
| 14.6 | 0.0146 |
| E16.5 retina | TAGCTTCCTC (4) TCCAAAAGCT (2)
| 18.1 | 0.0181 |
| E18.5 retina | TAGCTTCCTC (4) TCCAAAAGCT (2)
| 29.1 | 0.0291 |
| P0.5 retina | TAGCTTCCTC (4)
| 23.6 | 0.0236 |
| P2.5 retina | TAGCTTCCTC (4)
| 31.7 | 0.0317 |
| P4.5 retina | AGACCTTGTT (2) TAGCTTCCTC (4) TCCAAAAGCT (2)
| 49.6 | 0.0496 |
| P6.5 retina | AGACCTTGTT (2) TAGCTTCCTC (4)
| 36.7 | 0.0367 |
| P10.5 crx- retina | AGACCTTGTT (2) AGGAGAGTTT (4) TAGCTTCCTC (4) TAGCTTCCTT (2)
| 52.1 | 0.0521 |
| P10.5 crx+ retina | GGGACTCCTC (3) TAGCTTCCTC (4) TCCAAAAGCT (2)
| 23.1 | 0.0231 |
| Adult retinal | AGGAGAGTTT (4) TAGCTTCCTC (4) TAGCTTCCTT (2) TCCAAAAGCT (2)
| 31.6 | 0.0316 |
| ONL | TAGCTTCCTC (4)
| 21.1 | 0.0211 |