Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227598	Prkcbp1	protein kinase C binding protein 1	2		228880
Mm.227598	AA407782	expressed sequence AA407782	2		98763
Mm.227598	AL024039	expressed sequence AL024039	2		99150
Mm.227598	BC046401	cDNA sequence BC046401	2		394191
Mm.227598	1810021M19Rik	RIKEN cDNA 1810021M19 gene	2		69119
Mm.227598	2410087M07Rik	RIKEN cDNA 2410087M07 gene	2		73687
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAAAAAAAA (60) 17.9 0.0179 P8 Cb GC CTGTCCGTTA (6) 3.3 0.0033 P8 Cb GC CCCAAAGAGT (10) 1.6 0.0016 Cb medulloblastoma TCAAAAAAAA (60) 99.4 0.0994 Cb medulloblastoma CCCAAAGAGT (10) 2.3 0.0023 Cb medulloblastoma CTGTCCGTTA (6) 2.3 0.0023 Cb medulloblastoma TGAAGTCCCA (7) 2.3 0.0023 P8 GC+1d culture TCAAAAAAAA (60) 17.1 0.0171 P8 GC+1d culture CTGTCCGTTA (6) 2.3 0.0023 P8 GC+1d culture TGAAGTCCCA (7) 2.3 0.0023 P8 GC+SHH+1d culture TCAAAAAAAA (60) 51.5 0.0515 P8 GC+SHH+1d culture CTGTCCGTTA (6) 4.7 0.0047 P8 GC+SHH+1d culture CCCAAAGAGT (10) 1.2 0.0012 P8 GC+SHH+1d culture TGAAGTCCCA (7) 1.2 0.0012 3T3 fibroblasts TCAAAAAAAA (60) 7 0.007 3T3 fibroblasts CCACCGCCTC (8) 3.5 0.0035 3T3 fibroblasts CTGTCCGTTA (6) 3.5 0.0035 E15 cortex TCAAAAAAAA (60) 14.8 0.0148 E15 cortex CTGTCCGTTA (6) 9.9 0.0099 E15 cortex CCCAAAGAGT (10) 4.9 0.0049 P1 cortex TCAAAAAAAA (60) 22.7 0.0227 P1 cortex CCCAAAGAGT (10) 4.5 0.0045 Hypothalamus TCAAAAAAAA (60) 39.8 0.0398 E12.5 retina TCAAAAAAAA (60) 18.8 0.0188 E12.5 retina CCCAAAGAGT (10) 1.9 0.0019 E14.5 retina TCAAAAAAAA (60) 41.9 0.0419 E14.5 retina CCCAAAGAGT (10) 1.8 0.0018 E14.5 retina CTGTCCTGGG (8) 1.8 0.0018 E16.5 retina TCAAAAAAAA (60) 18.1 0.0181 E16.5 retina CCCAAAGAGT (10) 3.6 0.0036 E16.5 retina TGACACACAG (10) 3.6 0.0036 E16.5 retina CTGTCCGTTA (6) 1.8 0.0018 E18.5 retina TCAAAAAAAA (60) 49.1 0.0491 E18.5 retina CCCAAAGAGT (10) 1.8 0.0018 P0.5 retina TCAAAAAAAA (60) 31.4 0.0314 P2.5 retina TCAAAAAAAA (60) 35.2 0.0352 P4.5 retina TCAAAAAAAA (60) 37.6 0.0376 P4.5 retina CCCAAAGAGT (10) 4 0.004 P4.5 retina CCACCGCCTC (8) 2 0.002 P4.5 retina CTGTCCGTTA (6) 2 0.002 P4.5 retina TGACACACAG (10) 2 0.002 P6.5 retina TCAAAAAAAA (60) 31.7 0.0317 P6.5 retina CCACCGCCTC (8) 1.7 0.0017 P6.5 retina CTGTCCGTTA (6) 1.7 0.0017 P6.5 retina CTGTCCTGGG (8) 1.7 0.0017 P10.5 crx- retina TCAAAAAAAA (60) 14.9 0.0149 P10.5 crx- retina CTGTCCGTTA (6) 5.6 0.0056 P10.5 crx- retina CCCAAAGAGT (10) 3.7 0.0037 P10.5 crx+ retina TCAAAAAAAA (60) 17.3 0.0173 P10.5 crx+ retina CTGTCCTGGG (8) 3.8 0.0038 P10.5 crx+ retina TGACACACAG (10) 1.9 0.0019 Adult retinal TCAAAAAAAA (60) 20.4 0.0204 Adult retinal CTGTCCGTTA (6) 7.4 0.0074 ONL TCAAAAAAAA (60) 15.3 0.0153 ONL TGACACACAG (10) 3.8 0.0038 ONL CCCAAAGAGT (10) 1.9 0.0019