Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.227678
5730412N02Rik
RIKEN cDNA 5730412N02 gene
6
319734
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 46 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTAGCTCACA (
30
)
16.3
0.0163
P8 Cb GC
AAGGGGCTGA
(
3
)
9.8
0.0098
Cb medulloblastoma
GTAGCTCACA (
30
)
18.5
0.0185
Cb medulloblastoma
AAGGGGCTGA
(
3
)
6.9
0.0069
P8 GC+1d culture
GTAGCTCACA (
30
)
27.4
0.0274
P8 GC+1d culture
AAGGGGCTGA
(
3
)
10.3
0.0103
P8 GC+SHH+1d culture
GTAGCTCACA (
30
)
15.2
0.0152
P8 GC+SHH+1d culture
AAGGGGCTGA
(
3
)
3.5
0.0035
3T3 fibroblasts
GTAGCTCACA (
30
)
14
0.014
E15 cortex
GTAGCTCACA (
30
)
29.7
0.0297
P1 cortex
GTAGCTCACA (
30
)
13.6
0.0136
Hypothalamus
GTAGCTCACA (
30
)
29
0.029
Hypothalamus
AAGGGGCTGA
(
3
)
3.6
0.0036
Hypothalamus
TAGCAATTGA
1.8
0.0018
E12.5 retina
GTAGCTCACA (
30
)
30
0.03
E12.5 retina
AAGGGGCTGA
(
3
)
11.3
0.0113
E14.5 retina
GTAGCTCACA (
30
)
31
0.031
E14.5 retina
AAGGGGCTGA
(
3
)
5.5
0.0055
E16.5 retina
GTAGCTCACA (
30
)
41.7
0.0417
E16.5 retina
AAGGGGCTGA
(
3
)
3.6
0.0036
E18.5 retina
GTAGCTCACA (
30
)
16.4
0.0164
E18.5 retina
AAGGGGCTGA
(
3
)
3.6
0.0036
E18.5 retina
TAGCAATTGA
1.8
0.0018
P0.5 retina
GTAGCTCACA (
30
)
25.5
0.0255
P0.5 retina
AAGGGGCTGA
(
3
)
3.9
0.0039
P0.5 retina
TAGCAATTGA
2
0.002
P2.5 retina
GTAGCTCACA (
30
)
22.9
0.0229
P2.5 retina
TAGCAATTGA
5.3
0.0053
P2.5 retina
AAGGGGCTGA
(
3
)
3.5
0.0035
P4.5 retina
GTAGCTCACA (
30
)
25.8
0.0258
P4.5 retina
TAGCAATTGA
23.8
0.0238
P4.5 retina
AAGGGGCTGA
(
3
)
15.9
0.0159
P6.5 retina
TAGCAATTGA
26.7
0.0267
P6.5 retina
GTAGCTCACA (
30
)
18.3
0.0183
P6.5 retina
AAGGGGCTGA
(
3
)
3.3
0.0033
P10.5 crx- retina
TAGCAATTGA
18.6
0.0186
P10.5 crx- retina
GTAGCTCACA (
30
)
16.7
0.0167
P10.5 crx+ retina
GTAGCTCACA (
30
)
28.8
0.0288
P10.5 crx+ retina
AAGGGGCTGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAGCAATTGA
1.9
0.0019
Adult retinal
GTAGCTCACA (
30
)
16.7
0.0167
Adult retinal
TAGCAATTGA
3.7
0.0037
Adult retinal
AAGGGGCTGA
(
3
)
1.9
0.0019
ONL
GTAGCTCACA (
30
)
24.9
0.0249
ONL
TAGCAATTGA
11.5
0.0115
ONL
AAGGGGCTGA
(
3
)
1.9
0.0019
