Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.227704	Vdac3	voltage-dependent anion channel 3	8	8 8.0 cM	22335
Gene Ontology	anion transport | behavioral fear response | integral to membrane | learning | mitochondrial outer membrane | mitochondrion | nerve-nerve synaptic transmission | outer membrane | porin activity | synaptic transmission | voltage-dependent ion-selective channel activity
Human Homolog	VDAC3[voltage-dependent anion channel 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCTTTTGTT (2) 11.4 0.0114 P8 Cb GC GCTTTTGTTA (3) 11.4 0.0114 P8 Cb GC TTTGTGCCAC (9) 4.9 0.0049 P8 Cb GC GCTTTAATTA (7) 3.3 0.0033 P8 Cb GC GACAGCTGGC (3) 1.6 0.0016 Cb medulloblastoma GCTTTTGTTA (3) 18.5 0.0185 Cb medulloblastoma GCCTTTTGTT (2) 11.6 0.0116 Cb medulloblastoma GCCTTTTGGT (4) 2.3 0.0023 Cb medulloblastoma GCTGGGCCTG (5) 2.3 0.0023 P8 GC+1d culture GCCTTTTGTT (2) 33.1 0.0331 P8 GC+1d culture GCTTTTGTTA (3) 16 0.016 P8 GC+SHH+1d culture GCCTTTTGTT (2) 41 0.041 P8 GC+SHH+1d culture GCTTTTGTTA (3) 8.2 0.0082 P8 GC+SHH+1d culture GCTTTAATTA (7) 1.2 0.0012 E15 cortex GCCTTTTGTT (2) 19.8 0.0198 E15 cortex GCTTTTGTTA (3) 4.9 0.0049 P1 cortex GCTTTTGTTA (3) 18.2 0.0182 P1 cortex GCCTTTTGTT (2) 4.5 0.0045 Hypothalamus GCCTTTTGTT (2) 18.1 0.0181 Hypothalamus GCTTTTGTTA (3) 12.7 0.0127 Hypothalamus GCTGGGCCTG (5) 1.8 0.0018 E12.5 retina GCCTTTTGTT (2) 33.8 0.0338 E12.5 retina GCTTTTGTTA (3) 1.9 0.0019 E14.5 retina GCCTTTTGTT (2) 29.2 0.0292 E14.5 retina GCTTTTGTTA (3) 7.3 0.0073 E14.5 retina TTAAAGGAGC 3.6 0.0036 E14.5 retina CCTTCCAGGA (5) 1.8 0.0018 E14.5 retina GCCTTTTGGT (4) 1.8 0.0018 E16.5 retina GCCTTTTGTT (2) 14.5 0.0145 E16.5 retina GCTTTTGTTA (3) 5.4 0.0054 E16.5 retina GACAGCTGGC (3) 3.6 0.0036 E16.5 retina CCTTCCAGGA (5) 1.8 0.0018 E16.5 retina GCTTTAATTA (7) 1.8 0.0018 E18.5 retina GCCTTTTGTT (2) 27.3 0.0273 E18.5 retina GCTTTTGTTA (3) 1.8 0.0018 P0.5 retina GCCTTTTGTT (2) 13.7 0.0137 P0.5 retina GCTTTTGTTA (3) 3.9 0.0039 P0.5 retina GCCTTTTGGT (4) 2 0.002 P0.5 retina TTAAAGGAGC 2 0.002 P2.5 retina GCCTTTTGTT (2) 22.9 0.0229 P2.5 retina GCTTTTGTTA (3) 1.8 0.0018 P4.5 retina GCCTTTTGTT (2) 37.6 0.0376 P4.5 retina GCTTTTGTTA (3) 2 0.002 P6.5 retina GCCTTTTGTT (2) 18.3 0.0183 P6.5 retina GCTTTTGTTA (3) 3.3 0.0033 P10.5 crx- retina GCCTTTTGTT (2) 22.3 0.0223 P10.5 crx- retina GCTTTTGTTA (3) 7.4 0.0074 P10.5 crx+ retina GCCTTTTGTT (2) 17.3 0.0173 P10.5 crx+ retina GCTTTTGTTA (3) 7.7 0.0077 P10.5 crx+ retina CCTTCCAGGA (5) 1.9 0.0019 Adult retinal GCCTTTTGTT (2) 7.4 0.0074 Adult retinal GCTTTTGTTA (3) 3.7 0.0037 Adult retinal CCTTCCAGGA (5) 1.9 0.0019 ONL GCCTTTTGTT (2) 7.7 0.0077 ONL GCTTTTGTTA (3) 3.8 0.0038 ONL TTTGTGCCAC (9) 1.9 0.0019