Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.22779
1110067L22Rik
RIKEN cDNA 1110067L22 gene
8
68865
Gene Ontology
integral to membrane
Human Homolog
ARV1[likely ortholog of yeast ARV1]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCCTGTGGTG
(
11
)
8.2
0.0082
P8 Cb GC
TGGGGACCTG (
3
)
4.9
0.0049
Cb medulloblastoma
CCCTGTGGTG
(
11
)
6.9
0.0069
Cb medulloblastoma
TGGGGACCTG (
3
)
4.6
0.0046
P8 GC+1d culture
CCCTGTGGTG
(
11
)
8
0.008
P8 GC+1d culture
TGGGGACCTG (
3
)
6.8
0.0068
P8 GC+SHH+1d culture
TGGGGACCTG (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
CCCTGTGGTG
(
11
)
7
0.007
P8 GC+SHH+1d culture
TTTTGTTTTG (
11
)
2.3
0.0023
3T3 fibroblasts
TGGGGACCTG (
3
)
10.5
0.0105
3T3 fibroblasts
CCCTGGGTCC
(
2
)
7
0.007
E15 cortex
TGGGGACCTG (
3
)
4.9
0.0049
P1 cortex
TGGGGACCTG (
3
)
13.6
0.0136
E12.5 retina
CCCTGTGGTG
(
11
)
11.3
0.0113
E12.5 retina
TGGGGACCTG (
3
)
1.9
0.0019
E14.5 retina
CCCTGTGGTG
(
11
)
7.3
0.0073
E16.5 retina
CCCTGTGGTG
(
11
)
3.6
0.0036
E18.5 retina
CCCTGTGGTG
(
11
)
5.5
0.0055
E18.5 retina
TGGGGACCTG (
3
)
1.8
0.0018
P0.5 retina
CCCTGTGGTG
(
11
)
5.9
0.0059
P0.5 retina
TGGGGACCTG (
3
)
3.9
0.0039
P0.5 retina
CCCTGGGTCC
(
2
)
2
0.002
P2.5 retina
CCCTGTGGTG
(
11
)
8.8
0.0088
P2.5 retina
TGGGGACCTG (
3
)
8.8
0.0088
P4.5 retina
CCCTGTGGTG
(
11
)
4
0.004
P4.5 retina
CTTCCTGCCT (
5
)
2
0.002
P6.5 retina
CCCTGTGGTG
(
11
)
5
0.005
P6.5 retina
TGGGGACCTG (
3
)
3.3
0.0033
P10.5 crx- retina
CCCTGTGGTG
(
11
)
14.9
0.0149
P10.5 crx- retina
TGGGGACCTG (
3
)
1.9
0.0019
P10.5 crx- retina
TTTTGTTTTG (
11
)
1.9
0.0019
P10.5 crx+ retina
CCCTGTGGTG
(
11
)
11.5
0.0115
P10.5 crx+ retina
TGGGGACCTG (
3
)
9.6
0.0096
P10.5 crx+ retina
TTTTGTTTTG (
11
)
1.9
0.0019
Adult retinal
CCCTGTGGTG
(
11
)
14.8
0.0148
Adult retinal
TGGGGACCTG (
3
)
5.6
0.0056
Adult retinal
CTTCCTGCCT (
5
)
3.7
0.0037
Adult retinal
TTTTGTTTTG (
11
)
1.9
0.0019
ONL
CCCTGTGGTG
(
11
)
5.7
0.0057
ONL
TGGGGACCTG (
3
)
3.8
0.0038
ONL
CTTCCTGCCT (
5
)
1.9
0.0019
