Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.228071	C87129	expressed sequence C87129	2		97025
Mm.228071	5830435C13Rik	RIKEN cDNA 5830435C13 gene	2	2 36.0 cM	227940
Gene Ontology	DNA binding
Human Homolog	BAZ2B[bromodomain adjacent to zinc finger domain, 2B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCACACACA (29) 8.2 0.0082 P8 Cb GC GAAAGTGGTG (5) 4.9 0.0049 P8 Cb GC TGTACTTGAA (4) 4.9 0.0049 P8 Cb GC AAATAAATTT (7) 3.3 0.0033 P8 Cb GC CTCAAGTGCT (3) 3.3 0.0033 P8 Cb GC TGAAATAAAA (9) 1.6 0.0016 Cb medulloblastoma TGTACTTGAA (4) 76.3 0.0763 Cb medulloblastoma TGAAATAAAA (9) 11.6 0.0116 Cb medulloblastoma GAAAGTGGTG (5) 4.6 0.0046 Cb medulloblastoma TCAAAGGAAA (4) 2.3 0.0023 Cb medulloblastoma TGCACACACA (29) 2.3 0.0023 P8 GC+1d culture TGCACACACA (29) 9.1 0.0091 P8 GC+1d culture TGAAATAAAA (9) 3.4 0.0034 P8 GC+1d culture AAATAAATTT (7) 1.1 0.0011 P8 GC+1d culture GATACAAATG (3) 1.1 0.0011 P8 GC+SHH+1d culture TGCACACACA (29) 16.4 0.0164 P8 GC+SHH+1d culture AAATAAATTT (7) 3.5 0.0035 P8 GC+SHH+1d culture GATACAAATG (3) 2.3 0.0023 P8 GC+SHH+1d culture TCAAAGGAAA (4) 1.2 0.0012 3T3 fibroblasts TGCACACACA (29) 14 0.014 E15 cortex GAAAGTGGTG (5) 4.9 0.0049 E15 cortex TGAAATAAAA (9) 4.9 0.0049 P1 cortex TGAAATAAAA (9) 13.6 0.0136 P1 cortex TGCACACACA (29) 4.5 0.0045 P1 cortex TGTACTTGAA (4) 4.5 0.0045 Hypothalamus TGTACTTGAA (4) 32.6 0.0326 Hypothalamus TGAAATAAAA (9) 12.7 0.0127 Hypothalamus GAAAGTGGTG (5) 1.8 0.0018 Hypothalamus TGCACACACA (29) 1.8 0.0018 E12.5 retina TGAAATAAAA (9) 5.6 0.0056 E12.5 retina TGCACACACA (29) 5.6 0.0056 E14.5 retina TGCACACACA (29) 9.1 0.0091 E14.5 retina TGAAATAAAA (9) 5.5 0.0055 E14.5 retina AAATAAATTT (7) 1.8 0.0018 E14.5 retina GATACAAATG (3) 1.8 0.0018 E16.5 retina TGAAATAAAA (9) 10.9 0.0109 E16.5 retina TGCACACACA (29) 9.1 0.0091 E16.5 retina GATACAAATG (3) 3.6 0.0036 E18.5 retina TGAAATAAAA (9) 9.1 0.0091 E18.5 retina TGCACACACA (29) 7.3 0.0073 E18.5 retina AAATAAATTT (7) 1.8 0.0018 E18.5 retina TGTACTTGAA (4) 1.8 0.0018 P0.5 retina GAAAGTGGTG (5) 2 0.002 P0.5 retina TGCACACACA (29) 2 0.002 P2.5 retina TGCACACACA (29) 3.5 0.0035 P2.5 retina AAATAAATTT (7) 1.8 0.0018 P2.5 retina GAAAGTGGTG (5) 1.8 0.0018 P2.5 retina TGAAATAAAA (9) 1.8 0.0018 P2.5 retina TGTACTTGAA (4) 1.8 0.0018 P2.5 retina TGTCTCTGTC (4) 1.8 0.0018 P4.5 retina TGAAATAAAA (9) 15.9 0.0159 P4.5 retina AAATAAATTT (7) 4 0.004 P4.5 retina GAAAGTGGTG (5) 2 0.002 P4.5 retina TGCACACACA (29) 2 0.002 P4.5 retina TGTACTTGAA (4) 2 0.002 P6.5 retina TGCACACACA (29) 11.7 0.0117 P6.5 retina TGAAATAAAA (9) 5 0.005 P6.5 retina GATACAAATG (3) 1.7 0.0017 P6.5 retina TCAAAGGAAA (4) 1.7 0.0017 P6.5 retina TGTACTTGAA (4) 1.7 0.0017 P10.5 crx- retina TGAAATAAAA (9) 3.7 0.0037 P10.5 crx- retina TGCACACACA (29) 3.7 0.0037 P10.5 crx- retina AAATAAATTT (7) 1.9 0.0019 P10.5 crx+ retina TGCACACACA (29) 9.6 0.0096 P10.5 crx+ retina TGAAATAAAA (9) 3.8 0.0038 P10.5 crx+ retina GAAAGTGGTG (5) 1.9 0.0019 Adult retinal TGTCTCTGTC (4) 11.1 0.0111 Adult retinal TGCACACACA (29) 9.3 0.0093 Adult retinal GATACAAATG (3) 1.9 0.0019 Adult retinal TCAAAGGAAA (4) 1.9 0.0019 Adult retinal TGAAATAAAA (9) 1.9 0.0019 Adult retinal TGTACTTGAA (4) 1.9 0.0019 ONL TGCACACACA (29) 15.3 0.0153 ONL TGTCTCTGTC (4) 11.5 0.0115 ONL CTCAAGTGCT (3) 3.8 0.0038 ONL TGAAATAAAA (9) 3.8 0.0038 ONL GATACAAATG (3) 1.9 0.0019 ONL TCAAAGGAAA (4) 1.9 0.0019