Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.22849
BC028440
cDNA sequence BC028440
7
232987
Human Homolog
MGC4093[hypothetical protein MGC4093]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 64 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
GAAAAAAAAA (
204
)
45.7
0.0457
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
GAAAAAAAAA (
204
)
173.4
0.1734
Cb medulloblastoma
GGTAAAAAAA
(
5
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GAAAAAAAAA (
204
)
41.1
0.0411
P8 GC+1d culture
GGTAAAAAAA
(
5
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GAAAAAAAAA (
204
)
77.3
0.0773
P8 GC+SHH+1d culture
GGTAAAAAAA
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
AGCAGGGCCC
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GAAAAAAAAA (
204
)
54.4
0.0544
E15 cortex
GGTAAAAAAA
(
5
)
9.9
0.0099
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
GAAAAAAAAA (
204
)
45.5
0.0455
P1 cortex
AGCAGGGCCC
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GAAAAAAAAA (
204
)
67
0.067
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GAAAAAAAAA (
204
)
46.9
0.0469
E12.5 retina
GGTAAAAAAA
(
5
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
GAAAAAAAAA (
204
)
34.6
0.0346
E14.5 retina
GGTAAAAAAA
(
5
)
5.5
0.0055
E14.5 retina
AGCAGGGCCC
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
GAAAAAAAAA (
204
)
23.5
0.0235
E16.5 retina
AGCAGGGCCC
1.8
0.0018
E16.5 retina
GGTAAAAAAA
(
5
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
GAAAAAAAAA (
204
)
65.5
0.0655
E18.5 retina
GGTAAAAAAA
(
5
)
9.1
0.0091
E18.5 retina
AGCAGGGCCC
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GAAAAAAAAA (
204
)
35.3
0.0353
P0.5 retina
GGTAAAAAAA
(
5
)
3.9
0.0039
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GAAAAAAAAA (
204
)
86.2
0.0862
P2.5 retina
GGTAAAAAAA
(
5
)
5.3
0.0053
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GAAAAAAAAA (
204
)
51.5
0.0515
P4.5 retina
GGTAAAAAAA
(
5
)
7.9
0.0079
P4.5 retina
AGCAGGGCCC
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GAAAAAAAAA (
204
)
40
0.04
P6.5 retina
GGTAAAAAAA
(
5
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
GAAAAAAAAA (
204
)
16.7
0.0167
P10.5 crx- retina
AGCAGGGCCC
1.9
0.0019
P10.5 crx- retina
GGTAAAAAAA
(
5
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GAAAAAAAAA (
204
)
42.3
0.0423
P10.5 crx+ retina
AGCAGGGCCC
3.8
0.0038
P10.5 crx+ retina
GGTAAAAAAA
(
5
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GAAAAAAAAA (
204
)
16.7
0.0167
Adult retinal
AGCAGGGCCC
1.9
0.0019
Adult retinal
GAAACAATAA
(
3
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GAAAAAAAAA (
204
)
24.9
0.0249
ONL
GAAACAATAA
(
3
)
3.8
0.0038
