Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.22879	Apba1	amyloid beta (A4) precursor protein-binding, family A, member 1	19		319924
Gene Ontology	intracellular protein transport | intracellular signaling cascade
Human Homolog	APBA1[amyloid beta (A4) precursor protein-binding, family A, member 1 (X11)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 38 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGGATGTGG (3) 4.9 0.0049 P8 Cb GC AGGAGGAGGA (16) 1.6 0.0016 P8 Cb GC GCCAGGCCCA (4) 1.6 0.0016 Cb medulloblastoma TACACACTGG (3) 9.2 0.0092 Cb medulloblastoma TGGGATGTGG (3) 2.3 0.0023 P8 GC+1d culture TACACACTGG (3) 8 0.008 P8 GC+1d culture CCCAGGCCCA (11) 2.3 0.0023 P8 GC+1d culture GCAGTAGCCC 1.1 0.0011 P8 GC+SHH+1d culture TACACACTGG (3) 3.5 0.0035 P8 GC+SHH+1d culture AGGAGGAGGA (16) 1.2 0.0012 P8 GC+SHH+1d culture GCAGTAGCCC 1.2 0.0012 P8 GC+SHH+1d culture TGGGATGTGG (3) 1.2 0.0012 E15 cortex GCAGTAGCCC 4.9 0.0049 P1 cortex GCAGTAGCCC 9.1 0.0091 P1 cortex TACACACTGG (3) 4.5 0.0045 Hypothalamus TACACACTGG (3) 12.7 0.0127 Hypothalamus AGCCCTGTCT (3) 1.8 0.0018 Hypothalamus GCAGTAGCCC 1.8 0.0018 Hypothalamus GCCAGGCCCA (4) 1.8 0.0018 E12.5 retina TACACACTGG (3) 3.8 0.0038 E14.5 retina TACACACTGG (3) 3.6 0.0036 E14.5 retina CCCAGGCCCA (11) 1.8 0.0018 E14.5 retina GCCAGGCCCA (4) 1.8 0.0018 E18.5 retina TGGGATGTGG (3) 1.8 0.0018 P0.5 retina AGCCCTGTCT (3) 2 0.002 P0.5 retina AGGAGGAGGA (16) 2 0.002 P2.5 retina TACACACTGG (3) 8.8 0.0088 P4.5 retina TACACACTGG (3) 2 0.002 P6.5 retina TACACACTGG (3) 1.7 0.0017 P10.5 crx- retina TACACACTGG (3) 3.7 0.0037 P10.5 crx+ retina TACACACTGG (3) 5.8 0.0058 P10.5 crx+ retina AGGAGGAGGA (16) 3.8 0.0038 P10.5 crx+ retina AGCCCTGTCT (3) 1.9 0.0019 P10.5 crx+ retina TGGGATGTGG (3) 1.9 0.0019 Adult retinal GCAGTAGCCC 5.6 0.0056 Adult retinal TACACACTGG (3) 3.7 0.0037 ONL TACACACTGG (3) 1.9 0.0019 ONL TGGGATGTGG (3) 1.9 0.0019