Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.228903	Rnf14	ring finger protein 14	18	18 17.0 cM	56736
Mm.228903	1700074L02Rik	RIKEN cDNA 1700074L02 gene	18		73517
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC AAAAAAAAAG (19) 3.3 0.0033 P8 Cb GC TGTTTTCTAC (3) 3.3 0.0033 P8 Cb GC GCTCTACCCT (3) 1.6 0.0016 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma AAAAAAAAAG (19) 13.9 0.0139 Cb medulloblastoma TGTTTTCTAC (3) 9.2 0.0092 Cb medulloblastoma CCCTGTGCTG (5) 2.3 0.0023 Cb medulloblastoma GCTCTACCCT (3) 2.3 0.0023 Cb medulloblastoma TATACTGCAA (2) 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TGTTTTCTAC (3) 10.3 0.0103 P8 GC+1d culture GCTCTACCCT (3) 2.3 0.0023 P8 GC+1d culture TATACTGCAA (2) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAG (19) 1.1 0.0011 P8 GC+1d culture ATCCTCCTGC (7) 1.1 0.0011 P8 GC+1d culture CCCTGTGCTG (5) 1.1 0.0011 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TGTTTTCTAC (3) 10.5 0.0105 P8 GC+SHH+1d culture AAAAAAAAAG (19) 5.9 0.0059 P8 GC+SHH+1d culture GCTCTACCCT (3) 1.2 0.0012 P8 GC+SHH+1d culture TATACTGCAA (2) 1.2 0.0012 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex AAAAAAAAAG (19) 9.1 0.0091 P1 cortex AAGAAGACAG (11) 4.5 0.0045 P1 cortex TATACTGCAA (2) 4.5 0.0045 P1 cortex TGTTTTCTAC (3) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TGTTTTCTAC (3) 18.1 0.0181 Hypothalamus AAAAAAAAAG (19) 5.4 0.0054 Hypothalamus AAGAAGACAG (11) 1.8 0.0018 Hypothalamus GCTCTACCCT (3) 1.8 0.0018 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TATACTGCAA (2) 1.9 0.0019 E12.5 retina TGTTTTCTAC (3) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TGTTTTCTAC (3) 7.2 0.0072 E16.5 retina AAGAAGACAG (11) 3.6 0.0036 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina AAAAAAAAAG (19) 5.5 0.0055 E18.5 retina TATACTGCAA (2) 3.6 0.0036 E18.5 retina TGTTTTCTAC (3) 3.6 0.0036 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina GCTCTACCCT (3) 3.9 0.0039 P0.5 retina TGTTTTCTAC (3) 2 0.002 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina AAAAAAAAAG (19) 3.5 0.0035 P2.5 retina CCCTGTGCTG (5) 1.8 0.0018 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina AAAAAAAAAG (19) 13.9 0.0139 P4.5 retina TGTTTTCTAC (3) 4 0.004 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina AAAAAAAAAG (19) 8.3 0.0083 P6.5 retina TCCAAGCAGC (3) 1.7 0.0017 P10.5 crx- retina TGTTTTCTAC (3) 14.9 0.0149 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina ATCCTCCTGC (7) 3.7 0.0037 P10.5 crx- retina AAAAAAAAAG (19) 1.9 0.0019 P10.5 crx- retina CCCTGTGCTG (5) 1.9 0.0019 P10.5 crx- retina GCTCTACCCT (3) 1.9 0.0019 P10.5 crx- retina TATACTGCAA (2) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina AAAAAAAAAG (19) 7.7 0.0077 P10.5 crx+ retina TGTTTTCTAC (3) 7.7 0.0077 P10.5 crx+ retina CCCTGTGCTG (5) 1.9 0.0019 P10.5 crx+ retina TCCAAGCAGC (3) 1.9 0.0019 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TGTTTTCTAC (3) 9.3 0.0093 Adult retinal AAAAAAAAAG (19) 1.9 0.0019 Adult retinal ATCCTCCTGC (7) 1.9 0.0019 Adult retinal CCCTGTGCTG (5) 1.9 0.0019 Adult retinal GCTCTACCCT (3) 1.9 0.0019 Adult retinal TCCAAGCAGC (3) 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TGTTTTCTAC (3) 11.5 0.0115 ONL ATCCTCCTGC (7) 3.8 0.0038 ONL AAAAAAAAAG (19) 1.9 0.0019