Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.229141	Arfgef1	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	1		211673
Gene Ontology	biological_process unknown | cellular_component unknown | molecular_function unknown
Human Homolog	ARFGEF1[ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC AGATCCTGAA (5) 1.6 0.0016 P8 Cb GC CATTTTCAGC (6) 1.6 0.0016 P8 Cb GC GTACAAAATT (2) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GTTTTGGGAG (2) 4.6 0.0046 Cb medulloblastoma AGATCCTGAA (5) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture AAAACAAAGA (5) 1.1 0.0011 P8 GC+1d culture ATATAAAATA (3) 1.1 0.0011 P8 GC+1d culture GTTTTGGGAG (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture ATATAAAATA (3) 2.3 0.0023 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GTTTTGGGAG (2) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex AGATCCTGAA (5) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex ATATAAAATA (3) 4.5 0.0045 P1 cortex GTTTTGGGAG (2) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTTTTGGGAG (2) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AGATCCTGAA (5) 1.9 0.0019 E12.5 retina CATTTTCAGC (6) 1.9 0.0019 E12.5 retina GTTTTGGGAG (2) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GTTTTGGGAG (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina AAAACAAAGA (5) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GTTTTGGGAG (2) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GTTTTGGGAG (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GTTTTGGGAG (2) 4 0.004 P4.5 retina ATATAAAATA (3) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GTTTTGGGAG (2) 3.3 0.0033 P6.5 retina AAAACAAAGA (5) 1.7 0.0017 P6.5 retina AGATCCTGAA (5) 1.7 0.0017 P6.5 retina CATTTTCAGC (6) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GTTTTGGGAG (2) 20.4 0.0204 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTTTTGGGAG (2) 3.8 0.0038 P10.5 crx+ retina GTACAAAATT (2) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTTTTGGGAG (2) 9.3 0.0093 Adult retinal ATATAAAATA (3) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GTTTTGGGAG (2) 5.7 0.0057 ONL AAAACAAAGA (5) 1.9 0.0019 ONL GTACAAAATT (2) 1.9 0.0019