Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.229292	Tfam	transcription factor A, mitochondrial	10	10 38.0 cM	21780
Gene Ontology	DNA binding | mitochondrion | nucleus | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TFAM[transcription factor A, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTAAGTTGA 4.9 0.0049 P8 Cb GC CAGTGGTGAA (5) 1.6 0.0016 P8 Cb GC GAAAATTGAA (5) 1.6 0.0016 Cb medulloblastoma TGCAGACCTG (2) 2.3 0.0023 Cb medulloblastoma TGTAAGTTGA 2.3 0.0023 P8 GC+1d culture TGTAAGTTGA 3.4 0.0034 P8 GC+1d culture GAAAATTGAA (5) 2.3 0.0023 P8 GC+1d culture CAGTGGTGAA (5) 1.1 0.0011 P8 GC+SHH+1d culture CAGTGGTGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture GAAAATTGAA (5) 2.3 0.0023 P8 GC+SHH+1d culture ATTTATGTCT (4) 1.2 0.0012 E15 cortex CAGTGGTGAA (5) 4.9 0.0049 P1 cortex TGTAAGTTGA 4.5 0.0045 Hypothalamus CAGTGGTGAA (5) 3.6 0.0036 Hypothalamus GAAAATTGAA (5) 1.8 0.0018 Hypothalamus TGTAAGTTGA 1.8 0.0018 E12.5 retina TGTAAGTTGA 7.5 0.0075 E12.5 retina TGCAGACCTG (2) 3.8 0.0038 E12.5 retina GAAAATTGAA (5) 1.9 0.0019 E14.5 retina TGTAAGTTGA 5.5 0.0055 E16.5 retina CAGTGGTGAA (5) 3.6 0.0036 E16.5 retina TGTAAGTTGA 3.6 0.0036 E16.5 retina GAAAATTGAA (5) 1.8 0.0018 E18.5 retina GAAAATTGAA (5) 3.6 0.0036 E18.5 retina TGTAAGTTGA 1.8 0.0018 P0.5 retina CAGTGGTGAA (5) 3.9 0.0039 P0.5 retina ATTTATGTCT (4) 2 0.002 P0.5 retina GAAAATTGAA (5) 2 0.002 P2.5 retina TGTAAGTTGA 5.3 0.0053 P2.5 retina CAGTGGTGAA (5) 1.8 0.0018 P2.5 retina GAAAATTGAA (5) 1.8 0.0018 P4.5 retina ATTTATGTCT (4) 2 0.002 P4.5 retina CAGTGGTGAA (5) 2 0.002 P6.5 retina TGTAAGTTGA 3.3 0.0033 P6.5 retina CAGTGGTGAA (5) 1.7 0.0017 P6.5 retina GAAAATTGAA (5) 1.7 0.0017 P10.5 crx- retina TGTAAGTTGA 5.6 0.0056 P10.5 crx- retina ATTTATGTCT (4) 1.9 0.0019 P10.5 crx- retina CAGTGGTGAA (5) 1.9 0.0019 P10.5 crx+ retina TGTAAGTTGA 1.9 0.0019 Adult retinal CAGTGGTGAA (5) 9.3 0.0093 Adult retinal GAAAATTGAA (5) 1.9 0.0019 ONL TGTAAGTTGA 1.9 0.0019