Mouse Retina SAGE Library
[
Home
] [
Libraries
] [
Images
]
Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.23065
BC006835
cDNA sequence BC006835
407805
Mm.23065
Tnrc15
trinucleotide repeat containing 15
1
227331
Human Homolog
TNRC15[trinucleotide repeat containing 15]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 65 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAATTGGGGG (
5
)
6.5
0.0065
P8 Cb GC
GAAACAAAAA
(
9
)
3.3
0.0033
P8 Cb GC
TAGGTGCTGG (
12
)
3.3
0.0033
P8 Cb GC
GAGGAGGAGG (
35
)
1.6
0.0016
Cb medulloblastoma
AAGAAGAAAA (
14
)
2.3
0.0023
P8 GC+1d culture
AAATTGGGGG (
5
)
8
0.008
P8 GC+1d culture
AAGAAGAAGA (
9
)
2.3
0.0023
P8 GC+1d culture
AAGAAGAAAA (
14
)
1.1
0.0011
P8 GC+1d culture
TAGGTGCTGG (
12
)
1.1
0.0011
P8 GC+SHH+1d culture
GAGGAGGAGG (
35
)
1.2
0.0012
P8 GC+SHH+1d culture
GCCCTGAAAA
(
9
)
1.2
0.0012
3T3 fibroblasts
GAGGAGGAGG (
35
)
3.5
0.0035
3T3 fibroblasts
GCCCTGAAAA
(
9
)
3.5
0.0035
E15 cortex
AAATTGGGGG (
5
)
9.9
0.0099
E15 cortex
GGGTTTTGGG
(
9
)
9.9
0.0099
E15 cortex
GAGGAGGAGG (
35
)
4.9
0.0049
P1 cortex
GAGGAGGAGG (
35
)
4.5
0.0045
P1 cortex
GCCCTGAAAA
(
9
)
4.5
0.0045
Hypothalamus
GAGGAGGAGG (
35
)
7.2
0.0072
Hypothalamus
TAGGTGCTGG (
12
)
5.4
0.0054
Hypothalamus
AAATTGGGGG (
5
)
1.8
0.0018
Hypothalamus
AATTCCTTCT (
4
)
1.8
0.0018
Hypothalamus
GCCCTGAAAA
(
9
)
1.8
0.0018
E12.5 retina
TAGGTGCTGG (
12
)
3.8
0.0038
E12.5 retina
AAGAAGAAGA (
9
)
1.9
0.0019
E12.5 retina
AATTCCTTCT (
4
)
1.9
0.0019
E12.5 retina
GAGGAGGAGG (
35
)
1.9
0.0019
E12.5 retina
GCCCTGAAAA
(
9
)
1.9
0.0019
E14.5 retina
TAGGTGCTGG (
12
)
9.1
0.0091
E16.5 retina
TAGGTGCTGG (
12
)
7.2
0.0072
E16.5 retina
AAGAAGAAAA (
14
)
1.8
0.0018
E18.5 retina
TAGGTGCTGG (
12
)
1.8
0.0018
P0.5 retina
TAGGTGCTGG (
12
)
3.9
0.0039
P0.5 retina
AAATTGGGGG (
5
)
2
0.002
P0.5 retina
GCCCTGAAAA
(
9
)
2
0.002
P2.5 retina
TAGGTGCTGG (
12
)
5.3
0.0053
P2.5 retina
GAAACAAAAA
(
9
)
1.8
0.0018
P2.5 retina
GAGGAGGAGG (
35
)
1.8
0.0018
P4.5 retina
AAATTGGGGG (
5
)
4
0.004
P4.5 retina
GAAACAAAAA
(
9
)
4
0.004
P4.5 retina
GAGGAGGAGG (
35
)
2
0.002
P4.5 retina
GCCCTGAAAA
(
9
)
2
0.002
P4.5 retina
TAGGTGCTGG (
12
)
2
0.002
P6.5 retina
GCCCTGAAAA
(
9
)
5
0.005
P6.5 retina
TAGGTGCTGG (
12
)
5
0.005
P6.5 retina
AAATTGGGGG (
5
)
1.7
0.0017
P6.5 retina
AAGAAGAAGA (
9
)
1.7
0.0017
P6.5 retina
AATTCCTTCT (
4
)
1.7
0.0017
P6.5 retina
GAAACAAAAA
(
9
)
1.7
0.0017
P6.5 retina
GGGTTTTGGG
(
9
)
1.7
0.0017
P10.5 crx- retina
GCCCTGAAAA
(
9
)
11.1
0.0111
P10.5 crx- retina
AAGAAGAAAA (
14
)
1.9
0.0019
P10.5 crx- retina
GAGGAGGAGG (
35
)
1.9
0.0019
P10.5 crx+ retina
GCCCTGAAAA
(
9
)
7.7
0.0077
P10.5 crx+ retina
TAGGTGCTGG (
12
)
5.8
0.0058
Adult retinal
GCCCTGAAAA
(
9
)
9.3
0.0093
Adult retinal
GAGGAGGAGG (
35
)
3.7
0.0037
Adult retinal
GAAACAAAAA
(
9
)
1.9
0.0019
Adult retinal
TAGGTGCTGG (
12
)
1.9
0.0019
ONL
GCCCTGAAAA
(
9
)
9.6
0.0096
ONL
GAAACAAAAA
(
9
)
3.8
0.0038
ONL
TAGGTGCTGG (
12
)
3.8
0.0038
ONL
AAATTGGGGG (
5
)
1.9
0.0019
ONL
AAGAAGAAAA (
14
)
1.9
0.0019
ONL
GAGGAGGAGG (
35
)
1.9
0.0019
