Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2314	Prkcd	protein kinase C, delta	14	14 11.0 cM	18753
Gene Ontology	ATP binding | B-cell proliferation | diacylglycerol binding | humoral defense mechanism (sensu Vertebrata) | intracellular signaling cascade | membrane | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	PRKCD[protein kinase C, delta]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAGTCC (2) CTGTGTATGT (3) GCCCCCTTCC TAGGAAACTG TAGGAGACTG 9.7 0.0097 Cb medulloblastoma GCCCCCTTCC TAGGAGACTG 9.2 0.0092 P8 GC+1d culture CCTTTAGTCC (2) GCCCCCTTCC TAGGAAACTG TGTGTATGTG (3) 14.8 0.0148 P8 GC+SHH+1d culture CCTTTAGTCC (2) GCCCCCTTCC TAACAGAAAT TAGGAGACTG 9.3 0.0093 3T3 fibroblasts GCCCCCTTCC 35 0.035 E15 cortex CCTTTAGTCC (2) TAACAGAAAT TAGGAGACTG 24.7 0.0247 P1 cortex CCTTTAGTCC (2) CTGTGTATGT (3) TAACAGAAAT TAGGAGACTG 40.8 0.0408 Hypothalamus CCTTTAGTCC (2) TAACAGAAAT TAGGAAACTG TAGGAGACTG 43.4 0.0434 E12.5 retina CCTTTAGTCC (2) GCCCCCTTCC TAGGAGACTG 11.3 0.0113 E14.5 retina CCTTTAGTCC (2) GCTTCTCCTT (2) TAACAGAAAT TAGGAGACTG 30.9 0.0309 E16.5 retina CCTTTAGTCC (2) GCTTCTCCTT (2) TAACAGAAAT TAGGAGACTG 18.1 0.0181 E18.5 retina CCTTTAGTCC (2) 5.5 0.0055 P0.5 retina CCTTTAGTCC (2) GCTTCTCCTT (2) TAGGAGACTG 13.8 0.0138 P2.5 retina CCTTTAGTCC (2) TAGGAGACTG 7.1 0.0071 P4.5 retina CCTTTAGTCC (2) GCCCCCTTCC 6 0.006 P6.5 retina CCTTTAGTCC (2) TAGGAGACTG TGTGTATGTG (3) 6.7 0.0067 P10.5 crx- retina CCTTTAGTCC (2) GCCCCCTTCC TAACAGAAAT TAGGAGACTG 9.4 0.0094 P10.5 crx+ retina CCTTTAGTCC (2) GCCCCCTTCC TAACAGAAAT TAGGAGACTG TGTGTATGTG (3) 13.4 0.0134 Adult retinal CCTTTAGTCC (2) GCCCCCTTCC TAGGAGACTG TGTGTATGTG (3) 14.8 0.0148 ONL CCTTTAGTCC (2) CTGTGTATGT (3) TGTGTATGTG (3) 11.5 0.0115