Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.232728	Ssr3	signal sequence receptor, gamma	3		67437
Gene Ontology	endoplasmic reticulum | integral to membrane | receptor activity
Human Homolog	SSR3[signal sequence receptor, gamma (translocon-associated protein gamma)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 124 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTCAATGGTG (4) 8.2 0.0082 P8 Cb GC GAACATTGCA (5) 6.5 0.0065 P8 Cb GC GCCTCCCAAA (3) 3.3 0.0033 P8 Cb GC CAGCCAGTGT (3) 1.6 0.0016 P8 Cb GC GTAACCTGGA (2) 1.6 0.0016 P8 Cb GC TAAAAAAGTC 1.6 0.0016 P8 Cb GC TTACCAAAGC 1.6 0.0016 Cb medulloblastoma GAACATTGCA (5) 6.9 0.0069 Cb medulloblastoma CAGCCAGTGT (3) 2.3 0.0023 Cb medulloblastoma GGCCGGGAAT (5) 2.3 0.0023 Cb medulloblastoma TAGCTTGGCC 2.3 0.0023 Cb medulloblastoma TTAACTCCTT (2) 2.3 0.0023 Cb medulloblastoma TTCAATGGTG (4) 2.3 0.0023 P8 GC+1d culture GAACATTGCA (5) 10.3 0.0103 P8 GC+1d culture CAGCCAGTGT (3) 9.1 0.0091 P8 GC+1d culture GCCTCCCAAA (3) 4.6 0.0046 P8 GC+1d culture TAGCTTGGCC 2.3 0.0023 P8 GC+1d culture TTAACTCCTT (2) 2.3 0.0023 P8 GC+1d culture TTCAATGGTG (4) 2.3 0.0023 P8 GC+1d culture AAATAAAAAT (15) 1.1 0.0011 P8 GC+1d culture GGCCGGGAAT (5) 1.1 0.0011 P8 GC+1d culture GGCTCCCAAA (4) 1.1 0.0011 P8 GC+1d culture TTACCAAAGC 1.1 0.0011 P8 GC+SHH+1d culture CAGCCAGTGT (3) 10.5 0.0105 P8 GC+SHH+1d culture TTCAATGGTG (4) 5.9 0.0059 P8 GC+SHH+1d culture GCCTCCCAAA (3) 3.5 0.0035 P8 GC+SHH+1d culture GAACATTGCA (5) 2.3 0.0023 P8 GC+SHH+1d culture GTAACCTGGA (2) 2.3 0.0023 P8 GC+SHH+1d culture GGCCGGGAAT (5) 1.2 0.0012 3T3 fibroblasts GAACATTGCA (5) 217.3 0.2173 3T3 fibroblasts CAGCCAGTGT (3) 14 0.014 3T3 fibroblasts GCCTCCCAAA (3) 10.5 0.0105 3T3 fibroblasts TTCAATGGTG (4) 7 0.007 3T3 fibroblasts TAGCTTGGCC 3.5 0.0035 E15 cortex GGCCGGGAAT (5) 4.9 0.0049 P1 cortex GAACATTGCA (5) 18.2 0.0182 P1 cortex GCCTCCCAAA (3) 18.2 0.0182 P1 cortex CAGCCAGTGT (3) 9.1 0.0091 Hypothalamus GAACATTGCA (5) 14.5 0.0145 Hypothalamus CAGCCAGTGT (3) 5.4 0.0054 Hypothalamus TTCAATGGTG (4) 5.4 0.0054 Hypothalamus GGCCGGGAAT (5) 3.6 0.0036 Hypothalamus TGGTAGCACC 3.6 0.0036 Hypothalamus AAATAAAAAT (15) 1.8 0.0018 Hypothalamus TAAAAAAGTC 1.8 0.0018 Hypothalamus TAGCTTGGCC 1.8 0.0018 Hypothalamus TTACCAAAGC 1.8 0.0018 E12.5 retina TTCAATGGTG (4) 18.8 0.0188 E12.5 retina GCCTCCCAAA (3) 5.6 0.0056 E12.5 retina GTAACCTGGA (2) 5.6 0.0056 E12.5 retina GAACATTGCA (5) 3.8 0.0038 E12.5 retina CAGCCAGTGT (3) 1.9 0.0019 E14.5 retina TTCAATGGTG (4) 14.6 0.0146 E14.5 retina CAGCCAGTGT (3) 3.6 0.0036 E14.5 retina GAACATTGCA (5) 3.6 0.0036 E14.5 retina GCCTCCCAAA (3) 3.6 0.0036 E14.5 retina GGCCGGGAAT (5) 3.6 0.0036 E14.5 retina GTAACCTGGA (2) 1.8 0.0018 E14.5 retina TAAAAAAGTC 1.8 0.0018 E14.5 retina TCTCTAACCT 1.8 0.0018 E16.5 retina TTCAATGGTG (4) 29 0.029 E16.5 retina TCTCTAACCT 3.6 0.0036 E16.5 retina TTAACTCCTT (2) 3.6 0.0036 E16.5 retina TTACCAAAGC 3.6 0.0036 E16.5 retina AAATAAAAAT (15) 1.8 0.0018 E16.5 retina CAGCCAGTGT (3) 1.8 0.0018 E16.5 retina GAACATTGCA (5) 1.8 0.0018 E16.5 retina GCCTCCCAAA (3) 1.8 0.0018 E18.5 retina TTCAATGGTG (4) 10.9 0.0109 E18.5 retina GCCTCCCAAA (3) 1.8 0.0018 E18.5 retina TGGTAGCACC 1.8 0.0018 E18.5 retina TTAACTCCTT (2) 1.8 0.0018 P0.5 retina CAGCCAGTGT (3) 17.7 0.0177 P0.5 retina TTCAATGGTG (4) 15.7 0.0157 P0.5 retina GCCTCCCAAA (3) 5.9 0.0059 P0.5 retina GAACATTGCA (5) 3.9 0.0039 P0.5 retina GGCTCCCAAA (4) 2 0.002 P2.5 retina TTCAATGGTG (4) 12.3 0.0123 P2.5 retina GTAACCTGGA (2) 7 0.007 P2.5 retina CAGCCAGTGT (3) 3.5 0.0035 P2.5 retina AAATAAAAAT (15) 1.8 0.0018 P2.5 retina AGGACTTTAA (6) 1.8 0.0018 P2.5 retina GAACATTGCA (5) 1.8 0.0018 P2.5 retina GGCCGGGAAT (5) 1.8 0.0018 P4.5 retina CAGCCAGTGT (3) 7.9 0.0079 P4.5 retina GAACATTGCA (5) 5.9 0.0059 P4.5 retina TTCAATGGTG (4) 5.9 0.0059 P4.5 retina AAATAAAAAT (15) 4 0.004 P4.5 retina TTAACTCCTT (2) 4 0.004 P4.5 retina GGCCGGGAAT (5) 2 0.002 P4.5 retina GGCTCCCAAA (4) 2 0.002 P4.5 retina GTAACCTGGA (2) 2 0.002 P6.5 retina GAACATTGCA (5) 11.7 0.0117 P6.5 retina CAGCCAGTGT (3) 3.3 0.0033 P6.5 retina GCCTCCCAAA (3) 3.3 0.0033 P6.5 retina GGCTCCCAAA (4) 3.3 0.0033 P6.5 retina TTAACTCCTT (2) 3.3 0.0033 P6.5 retina TTCAATGGTG (4) 3.3 0.0033 P6.5 retina AAATAAAAAT (15) 1.7 0.0017 P10.5 crx- retina CAGCCAGTGT (3) 9.3 0.0093 P10.5 crx- retina GAACATTGCA (5) 7.4 0.0074 P10.5 crx- retina GCCTCCCAAA (3) 5.6 0.0056 P10.5 crx- retina TTCAATGGTG (4) 5.6 0.0056 P10.5 crx- retina AAATAAAAAT (15) 1.9 0.0019 P10.5 crx- retina GGCTCCCAAA (4) 1.9 0.0019 P10.5 crx- retina TTAACTCCTT (2) 1.9 0.0019 P10.5 crx+ retina CAGCCAGTGT (3) 13.5 0.0135 P10.5 crx+ retina GAACATTGCA (5) 5.8 0.0058 P10.5 crx+ retina GCCTCCCAAA (3) 5.8 0.0058 P10.5 crx+ retina AGGACTTTAA (6) 3.8 0.0038 P10.5 crx+ retina GTAACCTGGA (2) 1.9 0.0019 P10.5 crx+ retina TTAACTCCTT (2) 1.9 0.0019 P10.5 crx+ retina TTCAATGGTG (4) 1.9 0.0019 Adult retinal TTCAATGGTG (4) 7.4 0.0074 Adult retinal CAGCCAGTGT (3) 5.6 0.0056 Adult retinal GAACATTGCA (5) 5.6 0.0056 Adult retinal GCCTCCCAAA (3) 5.6 0.0056 Adult retinal TTAACTCCTT (2) 1.9 0.0019 ONL AAATAAAAAT (15) 11.5 0.0115 ONL CAGCCAGTGT (3) 5.7 0.0057 ONL GCCTCCCAAA (3) 5.7 0.0057 ONL TTAACTCCTT (2) 3.8 0.0038 ONL TTCAATGGTG (4) 3.8 0.0038 ONL GAACATTGCA (5) 1.9 0.0019