Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.233903
Nnat
neuronatin
2
2 H1 (2 88.0 cM)
18111
Gene Ontology
development
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 106 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GGGGGAGTGG
(
2
)
21.2
0.0212
P8 Cb GC
GGAGCCAGTG
(
2
)
8.2
0.0082
P8 Cb GC
TCAGCTGAAT (
3
)
8.2
0.0082
P8 Cb GC
GGTGGGAATG (
6
)
4.9
0.0049
P8 Cb GC
GCCGCAGTGG
(
3
)
3.3
0.0033
P8 Cb GC
GTGGGAGTGG
(
3
)
1.6
0.0016
Cb medulloblastoma
TCAGCTGAAT (
3
)
9.2
0.0092
Cb medulloblastoma
GGGGGAGTGG
(
2
)
2.3
0.0023
Cb medulloblastoma
GGTGGGAATG (
6
)
2.3
0.0023
P8 GC+1d culture
GGGGGAGTGG
(
2
)
54.8
0.0548
P8 GC+1d culture
TCAGCTGAAT (
3
)
13.7
0.0137
P8 GC+1d culture
GGAGCCAGTG
(
2
)
4.6
0.0046
P8 GC+1d culture
AACCGTTTCT
3.4
0.0034
P8 GC+1d culture
GTTCCGAAAG
1.1
0.0011
P8 GC+SHH+1d culture
GGGGGAGTGG
(
2
)
37.5
0.0375
P8 GC+SHH+1d culture
TCAGCTGAAT (
3
)
16.4
0.0164
P8 GC+SHH+1d culture
GGTGGGAATG (
6
)
3.5
0.0035
P8 GC+SHH+1d culture
AACCGTTTCT
2.3
0.0023
P8 GC+SHH+1d culture
GGAGCCAGTG
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GGGGAGTGGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GTCCAGCCAT
(
2
)
1.2
0.0012
3T3 fibroblasts
TCAGCTGAAT (
3
)
3.5
0.0035
E15 cortex
GGGGGAGTGG
(
2
)
326.6
0.3266
E15 cortex
GCCGCAGTGG
(
3
)
34.6
0.0346
E15 cortex
GGGGAGTGGA
(
3
)
9.9
0.0099
E15 cortex
TCAGCTGAAT (
3
)
9.9
0.0099
E15 cortex
GGAGCCAGTG
(
2
)
4.9
0.0049
E15 cortex
GGGGGGAGTG
(
2
)
4.9
0.0049
E15 cortex
GTGGGAGTGG
(
3
)
4.9
0.0049
P1 cortex
GGGGGAGTGG
(
2
)
163.6
0.1636
P1 cortex
GCCGCAGTGG
(
3
)
27.3
0.0273
P1 cortex
AACCGTTTCT
9.1
0.0091
P1 cortex
TCAGCTGAAT (
3
)
9.1
0.0091
P1 cortex
GGGGAGTGGA
(
3
)
4.5
0.0045
Hypothalamus
GGGGGAGTGG
(
2
)
43.5
0.0435
Hypothalamus
TCAGCTGAAT (
3
)
10.9
0.0109
Hypothalamus
AACCGTTTCT
1.8
0.0018
Hypothalamus
GCCGCAGTGG
(
3
)
1.8
0.0018
Hypothalamus
GGAGCCAGTG
(
2
)
1.8
0.0018
Hypothalamus
GGGGAGTGGA
(
3
)
1.8
0.0018
E12.5 retina
TCAGCTGAAT (
3
)
18.8
0.0188
E12.5 retina
GGGGGAGTGG
(
2
)
15
0.015
E12.5 retina
GGAGCCAGTG
(
2
)
5.6
0.0056
E12.5 retina
AGGGAGCAAG (
4
)
3.8
0.0038
E12.5 retina
AAGATCGAAC
1.9
0.0019
E12.5 retina
GTTCCGAAAG
1.9
0.0019
E14.5 retina
GGGGGAGTGG
(
2
)
18.2
0.0182
E14.5 retina
TCAGCTGAAT (
3
)
10.9
0.0109
E14.5 retina
GGAGCCAGTG
(
2
)
3.6
0.0036
E14.5 retina
AAGATCGAAC
1.8
0.0018
E14.5 retina
GAGGGAAGTT
1.8
0.0018
E14.5 retina
GTGGGAGTGG
(
3
)
1.8
0.0018
E16.5 retina
GGGGGAGTGG
(
2
)
23.5
0.0235
E16.5 retina
GGAGCCAGTG
(
2
)
7.2
0.0072
E16.5 retina
TCAGCTGAAT (
3
)
1.8
0.0018
E18.5 retina
GGGGGAGTGG
(
2
)
29.1
0.0291
E18.5 retina
GCCGCAGTGG
(
3
)
7.3
0.0073
E18.5 retina
TCAGCTGAAT (
3
)
7.3
0.0073
E18.5 retina
AAGATCGAAC
3.6
0.0036
E18.5 retina
GAGGGAAGTT
1.8
0.0018
E18.5 retina
GGAGCCAGTG
(
2
)
1.8
0.0018
P0.5 retina
GGGGGAGTGG
(
2
)
100.1
0.1001
P0.5 retina
GGAGCCAGTG
(
2
)
11.8
0.0118
P0.5 retina
GCCGCAGTGG
(
3
)
7.9
0.0079
P0.5 retina
TCAGCTGAAT (
3
)
3.9
0.0039
P0.5 retina
AAGATCGAAC
2
0.002
P0.5 retina
GGGGAGTGGA
(
3
)
2
0.002
P0.5 retina
GGGGGGAGTG
(
2
)
2
0.002
P0.5 retina
GGTGGGAATG (
6
)
2
0.002
P2.5 retina
GGGGGAGTGG
(
2
)
40.5
0.0405
P2.5 retina
TCAGCTGAAT (
3
)
12.3
0.0123
P2.5 retina
GGAGCCAGTG
(
2
)
7
0.007
P2.5 retina
GCCGCAGTGG
(
3
)
5.3
0.0053
P2.5 retina
GGTGGGAATG (
6
)
5.3
0.0053
P2.5 retina
AAGATCGAAC
1.8
0.0018
P2.5 retina
AGGGAGCAAG (
4
)
1.8
0.0018
P2.5 retina
GGGGGGAGTG
(
2
)
1.8
0.0018
P2.5 retina
GTCCAGCCAT
(
2
)
1.8
0.0018
P4.5 retina
GGGGGAGTGG
(
2
)
41.6
0.0416
P4.5 retina
TCAGCTGAAT (
3
)
21.8
0.0218
P4.5 retina
GGTGGGAATG (
6
)
5.9
0.0059
P4.5 retina
GGAGCCAGTG
(
2
)
4
0.004
P4.5 retina
AACCGTTTCT
2
0.002
P4.5 retina
AAGATCGAAC
2
0.002
P4.5 retina
GCCGCAGTGG
(
3
)
2
0.002
P4.5 retina
GTTCCGAAAG
2
0.002
P6.5 retina
GGGGGAGTGG
(
2
)
46.7
0.0467
P6.5 retina
TCAGCTGAAT (
3
)
11.7
0.0117
P6.5 retina
GGAGCCAGTG
(
2
)
5
0.005
P6.5 retina
GGGGAGTGGA
(
3
)
5
0.005
P6.5 retina
AACCGTTTCT
1.7
0.0017
P6.5 retina
GAGGGAAGTT
1.7
0.0017
P6.5 retina
GTCCAGCCAT
(
2
)
1.7
0.0017
P10.5 crx- retina
GGGGGAGTGG
(
2
)
20.4
0.0204
P10.5 crx- retina
TCAGCTGAAT (
3
)
18.6
0.0186
P10.5 crx- retina
GCCGCAGTGG
(
3
)
3.7
0.0037
P10.5 crx- retina
AACCGTTTCT
1.9
0.0019
P10.5 crx+ retina
GGGGGAGTGG
(
2
)
15.4
0.0154
P10.5 crx+ retina
TCAGCTGAAT (
3
)
15.4
0.0154
P10.5 crx+ retina
GCCGCAGTGG
(
3
)
1.9
0.0019
P10.5 crx+ retina
GGAGCCAGTG
(
2
)
1.9
0.0019
P10.5 crx+ retina
GGGGGGAGTG
(
2
)
1.9
0.0019
Adult retinal
TCAGCTGAAT (
3
)
9.3
0.0093
Adult retinal
GGGGGAGTGG
(
2
)
1.9
0.0019
ONL
TCAGCTGAAT (
3
)
7.7
0.0077
ONL
GGAGCCAGTG
(
2
)
1.9
0.0019