Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2344	Gnb1	guanine nucleotide binding protein, beta 1	4	4 79.4 cM	14688
Gene Ontology	acetyl choline receptor signaling, muscarinic pathway | G-protein coupled receptor protein signaling pathway | G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) | GTPase activity | heterotrimeric G-protein complex | heterotrimeric G-protein complex | membrane | phototransduction, visible light | RAS protein signal transduction | signal transducer activity | signal transduction
Human Homolog	GNB1[guanine nucleotide binding protein (G protein), beta polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 188 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGGGAAAAAA 14.7 0.0147 P8 Cb GC TCAAACTGCT 6.5 0.0065 P8 Cb GC AAAAACAAGT 4.9 0.0049 P8 Cb GC GCGACTGGAA 4.9 0.0049 P8 Cb GC AGACAAAAAA (5) 3.3 0.0033 P8 Cb GC AATGCCACAG 1.6 0.0016 P8 Cb GC CTGTAGAAAT (2) 1.6 0.0016 P8 Cb GC TCCAGGCCTA 1.6 0.0016 Cb medulloblastoma AGACAAAAAA (5) 13.9 0.0139 Cb medulloblastoma AGGGAAAAAA 11.6 0.0116 Cb medulloblastoma GCGACTGGAA 4.6 0.0046 Cb medulloblastoma GTGCCTGTTG 4.6 0.0046 Cb medulloblastoma AAAAACAAGT 2.3 0.0023 Cb medulloblastoma TCAAACTGCT 2.3 0.0023 Cb medulloblastoma TCCAGGCCTA 2.3 0.0023 Cb medulloblastoma TTAGGATGGC 2.3 0.0023 P8 GC+1d culture GCGACTGGAA 10.3 0.0103 P8 GC+1d culture AGACAAAAAA (5) 6.8 0.0068 P8 GC+1d culture AGGGAAAAAA 6.8 0.0068 P8 GC+1d culture TTCAGCAGCA 5.7 0.0057 P8 GC+1d culture AAAAACAAGT 3.4 0.0034 P8 GC+1d culture GTGTAAAAAT 3.4 0.0034 P8 GC+1d culture AATGCCACAG 2.3 0.0023 P8 GC+1d culture CTGTAGAAAT (2) 2.3 0.0023 P8 GC+1d culture TCCAGGCCTA 2.3 0.0023 P8 GC+1d culture ACAACCTTAT 1.1 0.0011 P8 GC+1d culture GTGCCTGTTG 1.1 0.0011 P8 GC+SHH+1d culture AGGGAAAAAA 19.9 0.0199 P8 GC+SHH+1d culture AGACAAAAAA (5) 7 0.007 P8 GC+SHH+1d culture GCGACTGGAA 7 0.007 P8 GC+SHH+1d culture AAAAACAAGT 5.9 0.0059 P8 GC+SHH+1d culture TTCAGCAGCA 5.9 0.0059 P8 GC+SHH+1d culture TGCTTGGCTA (2) 4.7 0.0047 P8 GC+SHH+1d culture TCAAACTGCT 2.3 0.0023 P8 GC+SHH+1d culture CTGTAGAAAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGCCTGTTG 1.2 0.0012 P8 GC+SHH+1d culture TCCAGGCCTA 1.2 0.0012 3T3 fibroblasts GCGACTGGAA 21 0.021 3T3 fibroblasts AATGCCACAG 3.5 0.0035 3T3 fibroblasts GTGCCTGTTG 3.5 0.0035 E15 cortex GCGACTGGAA 24.7 0.0247 E15 cortex AGGGAAAAAA 19.8 0.0198 E15 cortex GTGCCTGTTG 9.9 0.0099 E15 cortex AAAAACAAGT 4.9 0.0049 E15 cortex GCGACTGGGA 4.9 0.0049 E15 cortex GCTGTGGCAA 4.9 0.0049 E15 cortex TGCTTGGCTA (2) 4.9 0.0049 P1 cortex TGCTTGGCTA (2) 31.8 0.0318 P1 cortex AGGGAAAAAA 27.3 0.0273 P1 cortex AGACAAAAAA (5) 18.2 0.0182 P1 cortex TCAAACTGCT 4.5 0.0045 Hypothalamus AGACAAAAAA (5) 10.9 0.0109 Hypothalamus AGGGAAAAAA 10.9 0.0109 Hypothalamus TCAAACTGCT 9.1 0.0091 Hypothalamus TGCTTGGCTA (2) 7.2 0.0072 Hypothalamus GCGACTGGAA 5.4 0.0054 Hypothalamus AAAAACAAGT 3.6 0.0036 Hypothalamus CGATTCTAAG 3.6 0.0036 Hypothalamus TTCAGCAGCA 3.6 0.0036 Hypothalamus AATGCCACAG 1.8 0.0018 Hypothalamus GCTGTGGCAA 1.8 0.0018 Hypothalamus TTCACAGGTC 1.8 0.0018 E12.5 retina AAAAACAAGT 9.4 0.0094 E12.5 retina AGACAAAAAA (5) 9.4 0.0094 E12.5 retina AGGGAAAAAA 7.5 0.0075 E12.5 retina CTGTAGAAAT (2) 1.9 0.0019 E12.5 retina GCGACTGGAA 1.9 0.0019 E12.5 retina GTGTAAAAAT 1.9 0.0019 E12.5 retina TCAAACTGCT 1.9 0.0019 E12.5 retina TGACACTAGC 1.9 0.0019 E12.5 retina TGCTTGGCTA (2) 1.9 0.0019 E12.5 retina TTCACAGGTC 1.9 0.0019 E14.5 retina AGGGAAAAAA 7.3 0.0073 E14.5 retina TCAAACTGCT 7.3 0.0073 E14.5 retina AGACAAAAAA (5) 5.5 0.0055 E14.5 retina GCGACTGGAA 3.6 0.0036 E14.5 retina GTGCCTGTTG 3.6 0.0036 E14.5 retina AAAAACAAGT 1.8 0.0018 E14.5 retina TTAGGATGGC 1.8 0.0018 E16.5 retina AGGGAAAAAA 7.2 0.0072 E16.5 retina GTGCCTGTTG 5.4 0.0054 E16.5 retina AAAAACAAGT 1.8 0.0018 E16.5 retina AATGCCACAG 1.8 0.0018 E16.5 retina AGACAAAAAA (5) 1.8 0.0018 E16.5 retina CTGTAGAAAT (2) 1.8 0.0018 E16.5 retina GCGACTGGAA 1.8 0.0018 E16.5 retina TCAAACTGCT 1.8 0.0018 E16.5 retina TCCAGGCCTA 1.8 0.0018 E16.5 retina TGACACTAGC 1.8 0.0018 E16.5 retina TTCAGCAGCA 1.8 0.0018 E18.5 retina AGGGAAAAAA 18.2 0.0182 E18.5 retina AGACAAAAAA (5) 9.1 0.0091 E18.5 retina AAAAACAAGT 7.3 0.0073 E18.5 retina GCGACTGGAA 5.5 0.0055 E18.5 retina GTGCCTGTTG 1.8 0.0018 E18.5 retina TCAAACTGCT 1.8 0.0018 E18.5 retina TGCTTGGCTA (2) 1.8 0.0018 P0.5 retina GCGACTGGAA 9.8 0.0098 P0.5 retina AGGGAAAAAA 7.9 0.0079 P0.5 retina AAAAACAAGT 3.9 0.0039 P0.5 retina AATGCCACAG 2 0.002 P0.5 retina AGACAAAAAA (5) 2 0.002 P0.5 retina GTGCCTGTTG 2 0.002 P0.5 retina GTGTAAAAAT 2 0.002 P0.5 retina TCAAACTGCT 2 0.002 P0.5 retina TCCAGGCCTA 2 0.002 P0.5 retina TTCAGCAGCA 2 0.002 P2.5 retina AGGGAAAAAA 10.6 0.0106 P2.5 retina TGCTTGGCTA (2) 8.8 0.0088 P2.5 retina AGACAAAAAA (5) 7 0.007 P2.5 retina TCAAACTGCT 7 0.007 P2.5 retina AAAAACAAGT 5.3 0.0053 P2.5 retina ACAACCTTAT 1.8 0.0018 P2.5 retina GCGACTGGAA 1.8 0.0018 P2.5 retina GCTGTGGCAA 1.8 0.0018 P2.5 retina TCCAGGCCTA 1.8 0.0018 P4.5 retina GCGACTGGAA 13.9 0.0139 P4.5 retina AGGGAAAAAA 11.9 0.0119 P4.5 retina AGACAAAAAA (5) 7.9 0.0079 P4.5 retina TGCTTGGCTA (2) 7.9 0.0079 P4.5 retina GTGCCTGTTG 4 0.004 P4.5 retina AAAAACAAGT 2 0.002 P4.5 retina ACAACCTTAT 2 0.002 P6.5 retina GCGACTGGAA 30 0.03 P6.5 retina AGGGAAAAAA 28.3 0.0283 P6.5 retina AGACAAAAAA (5) 15 0.015 P6.5 retina AAAAACAAGT 11.7 0.0117 P6.5 retina TGCTTGGCTA (2) 10 0.01 P6.5 retina TCAAACTGCT 6.7 0.0067 P6.5 retina CTGTAGAAAT (2) 3.3 0.0033 P6.5 retina GCAAAGAGAA 1.7 0.0017 P6.5 retina GTGCCTGTTG 1.7 0.0017 P6.5 retina TTCAGCAGCA 1.7 0.0017 P10.5 crx- retina GCGACTGGAA 22.3 0.0223 P10.5 crx- retina AGGGAAAAAA 20.4 0.0204 P10.5 crx- retina TCCAGGCCTA 11.1 0.0111 P10.5 crx- retina TCAAACTGCT 7.4 0.0074 P10.5 crx- retina AAAAACAAGT 5.6 0.0056 P10.5 crx- retina AATGCCACAG 5.6 0.0056 P10.5 crx- retina AGACAAAAAA (5) 3.7 0.0037 P10.5 crx- retina ACAACATTAT 1.9 0.0019 P10.5 crx- retina GCAAAGAGAA 1.9 0.0019 P10.5 crx- retina GCGACTGGGA 1.9 0.0019 P10.5 crx- retina GTGCCTGTTG 1.9 0.0019 P10.5 crx- retina TTCAGCAGCA 1.9 0.0019 P10.5 crx+ retina GCGACTGGAA 67.3 0.0673 P10.5 crx+ retina AGGGAAAAAA 51.9 0.0519 P10.5 crx+ retina AAAAACAAGT 15.4 0.0154 P10.5 crx+ retina AGACAAAAAA (5) 11.5 0.0115 P10.5 crx+ retina CTGTAGAAAT (2) 9.6 0.0096 P10.5 crx+ retina TCAAACTGCT 9.6 0.0096 P10.5 crx+ retina AATGCCACAG 7.7 0.0077 P10.5 crx+ retina TGCTTGGCTA (2) 7.7 0.0077 P10.5 crx+ retina GTGTAAAAAT 5.8 0.0058 P10.5 crx+ retina GCAAAGAGAA 3.8 0.0038 P10.5 crx+ retina TCCAGGCCTA 3.8 0.0038 P10.5 crx+ retina ACAACATTAT 1.9 0.0019 P10.5 crx+ retina CGATTCTAAG 1.9 0.0019 P10.5 crx+ retina GTGCCTGTTG 1.9 0.0019 Adult retinal GCGACTGGAA 74.1 0.0741 Adult retinal AGGGAAAAAA 53.7 0.0537 Adult retinal AGACAAAAAA (5) 38.9 0.0389 Adult retinal GCAAAGAGAA 7.4 0.0074 Adult retinal TTCAGCAGCA 7.4 0.0074 Adult retinal TCCAGGCCTA 5.6 0.0056 Adult retinal AAAAACAAGT 3.7 0.0037 Adult retinal AATGCCACAG 3.7 0.0037 Adult retinal TCAAACTGCT 3.7 0.0037 Adult retinal ACAACATTAT 1.9 0.0019 Adult retinal CTGTAGAAAT (2) 1.9 0.0019 Adult retinal GTGCCTGTTG 1.9 0.0019 Adult retinal GTGTAAAAAT 1.9 0.0019 Adult retinal TGCTTGGCTA (2) 1.9 0.0019 Adult retinal TTAGGATGGC 1.9 0.0019 ONL AGGGAAAAAA 103.4 0.1034 ONL GCGACTGGAA 76.6 0.0766 ONL AAAAACAAGT 65.1 0.0651 ONL AGACAAAAAA (5) 57.5 0.0575 ONL AATGCCACAG 28.7 0.0287 ONL CTGTAGAAAT (2) 13.4 0.0134 ONL TCAAACTGCT 13.4 0.0134 ONL GTGTAAAAAT 11.5 0.0115 ONL TGCTTGGCTA (2) 9.6 0.0096 ONL TTCAGCAGCA 3.8 0.0038 ONL GCAAAGAGAA 1.9 0.0019 ONL GCGACTGGGA 1.9 0.0019 ONL GCTGTGGCAA 1.9 0.0019 ONL TGACACTAGC 1.9 0.0019