Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2344	Gnb1	guanine nucleotide binding protein, beta 1	4	4 79.4 cM	14688
Gene Ontology	acetyl choline receptor signaling, muscarinic pathway | G-protein coupled receptor protein signaling pathway | G-protein signaling, coupled to IP3 second messenger (phospholipase C activating) | GTPase activity | heterotrimeric G-protein complex | heterotrimeric G-protein complex | membrane | phototransduction, visible light | RAS protein signal transduction | signal transducer activity | signal transduction
Human Homolog	GNB1[guanine nucleotide binding protein (G protein), beta polypeptide 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 362 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCGACTGGAA GCTGTGGCAC (2) GGCAAGAAGA TCAAACTGCT TCCAGGCCTA TGGTTTTGGG 456.7 0.4567 Cb medulloblastoma AAAAAAAAAA (2) AAAAACAAGT AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CGCTGGTTCC GCGACTGGAA GTGCCTGTTG TCAAACTGCT TCCAGGCCTA TGGTTTTGGG TGTGTTTGTG (2) TTAGGATGGC 982.7 0.9827 P8 GC+1d culture AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG ACAACCTTAT AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCGACTGGAA GGGGAAGAGA GTGCCTGTTG GTGTAAAAAT TCCAGGCCTA TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 467.7 0.4677 P8 GC+SHH+1d culture AAAAAAAAAA (2) AAAAACAAGT AAAAACAGGT AGAAAAAAAA (2) AGACAAAAAA (5) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCGACTGGAA GGCAAGAAGA GTGCCTGTTG TCAAACTGCT TCCAGGCCTA TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 564.5 0.5645 3T3 fibroblasts AAAAAAAAAA (2) AATGCCACAG AGAAAAAAAA (2) CGCTGGTTCC GCGACTGGAA GTGCCTGTTG TGGTTTTGGG 182.2 0.1822 E15 cortex AAAAAAAAAA (2) AAAAACAAGT AGAAAAAAAA (2) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCGACTGGAA GCGACTGGGA GCTGTGGCAA GTGCCTGTTG TGCTTGGCTA (2) TGGTTTTGGG 489.6 0.4896 P1 cortex AAAAAAAAAA (2) ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC TCAAACTGCT TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) 395.3 0.3953 Hypothalamus AAAAAAAAAA (2) AAAAACAAGT AAAAACAGGT AATGCCACAG ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGCCCTGTCT AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGATTCTAAG CGCTGGTTCC GCGACAAGCA GCGACTGGAA GCTGTGGCAA TCAAACTGCT TGCTTGGCTA (2) TGGTTTTGGG TTCACAGGTC TTCAGCAGCA 369.4 0.3694 E12.5 retina AAAAAAAAAA (2) AAAAACAAGT AGAAAAAAAA (2) AGACAAAAAA (5) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCGACTGGAA GCTGTGGCAC (2) GTGTAAAAAT TCAAACTGCT TGACACTAGC TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) TTCACAGGTC 413.3 0.4133 E14.5 retina AAAAAAAAAA (2) AAAAACAAGT AAAAACAGGT AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCAAGGCTGG GCGACTGGAA GGCAAGAAGA GTGCCTGTTG TCAAACTGCT TGCTCTTAAC (2) TGGTTTTGGG TTAGGATGGC 491.6 0.4916 E16.5 retina AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCGACTGGAA GGGGAAGAGA GTGCCTGTTG TCAAACTGCT TCCAGGCCTA TGACACTAGC TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 492.5 0.4925 E18.5 retina AAAAAAAAAA (2) AAAAACAAGT ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCGACAAGCA GCGACTGGAA GTGCCTGTTG TCAAACTGCT TGCTTGGCTA (2) TGGTTTTGGG 725.7 0.7257 P0.5 retina AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGCCCTGTCT AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCGACTGGAA GTGCCTGTTG GTGTAAAAAT TCAAACTGCT TCCAGGCCTA TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 377.2 0.3772 P2.5 retina AAAAAAAAAA (2) AAAAACAAGT ACAACCTTAT ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCGACAAGCA GCGACTGGAA GCTGTGGCAA TCAAACTGCT TCCAGGCCTA TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) 593.2 0.5932 P4.5 retina AAAAAAAAAA (2) AAAAACAAGT AAAAACAGGT ACAACCTTAT AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCGACAAGCA GCGACTGGAA GGCAAGAAGA GTGCCTGTTG TGCTCTTAAC (2) TGCTTGGCTA (2) TGGTTTTGGG 564.9 0.5649 P6.5 retina AAAAAAAAAA (2) AAAAACAAGT AAAAACAGGT AGAAAAAAAA (2) AGACAAAAAA (5) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCAAAGAGAA GCGACAAGCA GCGACTGGAA GGGGAAGAGA GTGCCTGTTG TCAAACTGCT TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 543.5 0.5435 P10.5 crx- retina AAAAAAAAAA (2) AAAAACAAGT AAAAACAGGT AATGCCACAG ACAACATTAT AGAAAAAAAA (2) AGACAAAAAA (5) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC GCAAAGAGAA GCGACTGGAA GCGACTGGGA GTGCCTGTTG TCAAACTGCT TCCAGGCCTA TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 525.9 0.5259 P10.5 crx+ retina AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG ACAACATTAT AGAAAAAAAA (2) AGACAAAAAA (5) AGCCCTGTCT AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGATTCTAAG CGCTGGTTCC CTGTAGAAAT (2) GCAAAGAGAA GCGACAAGCA GCGACTGGAA GTGCCTGTTG GTGTAAAAAT TCAAACTGCT TCCAGGCCTA TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) 518.9 0.5189 Adult retinal AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG ACAACATTAT ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGGAAAAAAA (2) AGGGAAAAAA CAGATCTTCG CGCTGGTTCC CTGTAGAAAT (2) GCAAAGAGAA GCGACAAGCA GCGACTGGAA GTGCCTGTTG GTGTAAAAAT TCAAACTGCT TCCAGGCCTA TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) TTAGGATGGC TTCAGCAGCA 346.8 0.3468 ONL AAAAAAAAAA (2) AAAAACAAGT AATGCCACAG ACTACAAACG AGAAAAAAAA (2) AGACAAAAAA (5) AGACCTTGTC (3) AGGAAAAAAA (2) AGGGAAAAAA CGCTGGTTCC CTGTAGAAAT (2) GCAAAGAGAA GCAAGGCTGG GCGACTGGAA GCGACTGGGA GCTGTGGCAA GTGTAAAAAT TCAAACTGCT TGACACTAGC TGCTCTTAAC (2) TGCTTGGCTA (2) TGGTTTTGGG TGTGTTTGTG (2) TTCAGCAGCA 614.5 0.6145