Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.234641	Rorb	RAR-related orphan receptor beta	4	19 B (4 38.0 cM)	225998
Gene Ontology	DNA binding | ligand-dependent nuclear receptor activity | nucleus | protein binding | receptor activity | regulation of transcription, DNA-dependent | steroid hormone receptor activity | transcription factor activity
Human Homolog	RORB[RAR-related orphan receptor B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 19 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAATAATAAA (8) 168 0.168 P8 Cb GC TACCCACACA (5) 3.3 0.0033 P8 Cb GC CCGCCTTTCT 1.6 0.0016 Cb medulloblastoma GAATAATAAA (8) 152.6 0.1526 Cb medulloblastoma CAAAAGGAAA (8) 2.3 0.0023 Cb medulloblastoma TACCCACACA (5) 2.3 0.0023 Cb medulloblastoma TGAGTGTGTG (7) 2.3 0.0023 P8 GC+1d culture GAATAATAAA (8) 147.3 0.1473 P8 GC+1d culture TACCCACACA (5) 3.4 0.0034 P8 GC+SHH+1d culture GAATAATAAA (8) 165.1 0.1651 P8 GC+SHH+1d culture CAAAAGGAAA (8) 1.2 0.0012 3T3 fibroblasts GAATAATAAA (8) 7 0.007 E15 cortex GAATAATAAA (8) 9.9 0.0099 P1 cortex GAATAATAAA (8) 113.6 0.1136 Hypothalamus GAATAATAAA (8) 193.8 0.1938 E12.5 retina GAATAATAAA (8) 178.3 0.1783 E12.5 retina CCGCCTTTCT 1.9 0.0019 E12.5 retina TACCCACACA (5) 1.9 0.0019 E12.5 retina TGAGTGTGTG (7) 1.9 0.0019 E14.5 retina GAATAATAAA (8) 180.4 0.1804 E14.5 retina TGAGTGTGTG (7) 1.8 0.0018 E16.5 retina GAATAATAAA (8) 99.6 0.0996 E16.5 retina CCGCCTTTCT 1.8 0.0018 E18.5 retina GAATAATAAA (8) 285.6 0.2856 E18.5 retina CCGCCTTTCT 1.8 0.0018 E18.5 retina GGGACTTAAG (2) 1.8 0.0018 E18.5 retina TACCCACACA (5) 1.8 0.0018 P0.5 retina GAATAATAAA (8) 51 0.051 P2.5 retina GAATAATAAA (8) 105.6 0.1056 P2.5 retina GGGACTTAAG (2) 3.5 0.0035 P2.5 retina TACCCACACA (5) 3.5 0.0035 P4.5 retina GAATAATAAA (8) 190.2 0.1902 P4.5 retina CCGCCTTTCT 4 0.004 P4.5 retina CAAAAGGAAA (8) 2 0.002 P4.5 retina GGGACTTAAG (2) 2 0.002 P6.5 retina GAATAATAAA (8) 105 0.105 P6.5 retina CAAAAGGAAA (8) 1.7 0.0017 P6.5 retina TACCCACACA (5) 1.7 0.0017 P10.5 crx- retina GAATAATAAA (8) 102.2 0.1022 P10.5 crx- retina GGGACTTAAG (2) 7.4 0.0074 P10.5 crx- retina CCGCCTTTCT 1.9 0.0019 P10.5 crx- retina TACCCACACA (5) 1.9 0.0019 P10.5 crx- retina TGAGTGTGTG (7) 1.9 0.0019 P10.5 crx+ retina GAATAATAAA (8) 48.1 0.0481 P10.5 crx+ retina GGGACTTAAG (2) 5.8 0.0058 P10.5 crx+ retina TACCCACACA (5) 3.8 0.0038 P10.5 crx+ retina TGAGTGTGTG (7) 1.9 0.0019 Adult retinal GAATAATAAA (8) 11.1 0.0111 Adult retinal CCGCCTTTCT 1.9 0.0019 Adult retinal TACCCACACA (5) 1.9 0.0019 ONL GAATAATAAA (8) 47.9 0.0479 ONL GGGACTTAAG (2) 1.9 0.0019