| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AGCGCATTCT (3) GAGTGAACCT (3) GGGACTGTTA (3) TCATCCAATG (3) TTGATAATGG (3) TTTCTCTCAA (3)
| 12.9 | 0.0129 |
| P8 GC+1d culture | AATAACCACA (3) AGCGCATTCT (3) CTTAGTCTAA (3) GAGTGAACCT (3)
| 4.4 | 0.0044 |
| P8 GC+SHH+1d culture | AATAACCACA (3) AGCGCATTCT (3) GAGTGAACCT (3) GTGATGTCTA (4) TTTCTCTCAA (3)
| 6 | 0.006 |
| 3T3 fibroblasts | GAGTGAACCT (3)
| 3.5 | 0.0035 |
| E15 cortex | CTTAGTCTAA (3)
| 4.9 | 0.0049 |
| P1 cortex | AATAACCACA (3) AGCGCATTCT (3) GAGTGAACCT (3) TCATCCAATG (3) TTTCTCTCAA (3)
| 27.1 | 0.0271 |
| E12.5 retina | AGCGCATTCT (3) GGGACTGTTA (3) GTGATGTCTA (4) TTGATAATGG (3) TTTCTCTCAA (3)
| 13.3 | 0.0133 |
| E14.5 retina | AGCGCATTCT (3) GAGTGAACCT (3) GTGATGTCTA (4)
| 10.9 | 0.0109 |
| E16.5 retina | CTTAGTCTAA (3) GAGTGAACCT (3)
| 7.2 | 0.0072 |
| E18.5 retina | AGCGCATTCT (3) TTTCTCTCAA (3)
| 3.6 | 0.0036 |
| P0.5 retina | AGCGCATTCT (3) GGGACTGTTA (3)
| 4 | 0.004 |
| P2.5 retina | AGCGCATTCT (3)
| 1.8 | 0.0018 |
| P4.5 retina | TTGATAATGG (3)
| 4 | 0.004 |
| P6.5 retina | AGCGCATTCT (3) TTGATAATGG (3)
| 3.4 | 0.0034 |
| P10.5 crx- retina | AATAACCACA (3)
| 1.9 | 0.0019 |
| P10.5 crx+ retina | TTGATAATGG (3)
| 3.8 | 0.0038 |