Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.235238
BC005624
cDNA sequence BC005624
2
227707
Human Homolog
C9orf78[chromosome 9 open reading frame 78]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 59 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AACTCCCTCC
(
4
)
1.6
0.0016
P8 Cb GC
GCTGTGAACT (
5
)
1.6
0.0016
P8 Cb GC
TGTGTGTGCC (
5
)
1.6
0.0016
Cb medulloblastoma
AACTCCCTCC
(
4
)
2.3
0.0023
Cb medulloblastoma
GCTGTGAACT (
5
)
2.3
0.0023
Cb medulloblastoma
GTGTGAACTA
(
4
)
2.3
0.0023
Cb medulloblastoma
TCCTCTTGCA
(
2
)
2.3
0.0023
Cb medulloblastoma
TGTGTGTGCC (
5
)
2.3
0.0023
P8 GC+1d culture
AACTCCCTCC
(
4
)
3.4
0.0034
P8 GC+1d culture
TGTGTGTGCC (
5
)
2.3
0.0023
P8 GC+1d culture
GCTGTGAACT (
5
)
1.1
0.0011
P8 GC+1d culture
GTGTGAACTA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
AACTCCCTCC
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTGTGAACT (
5
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTTGTGAAC (
6
)
1.2
0.0012
P8 GC+SHH+1d culture
GTGTGAACTA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
TGTGTGTGCC (
5
)
1.2
0.0012
3T3 fibroblasts
AACTCCCTCC
(
4
)
3.5
0.0035
3T3 fibroblasts
GCTGTGAACT (
5
)
3.5
0.0035
3T3 fibroblasts
TGTGTGTGCC (
5
)
3.5
0.0035
P1 cortex
AACTCCCTCC
(
4
)
4.5
0.0045
P1 cortex
AAGAAACTGA
(
5
)
4.5
0.0045
P1 cortex
TGTGTGTGCC (
5
)
4.5
0.0045
Hypothalamus
AGGAACAGAA
(
6
)
3.6
0.0036
Hypothalamus
AACTCCCTCC
(
4
)
1.8
0.0018
Hypothalamus
GTGTGAACTA
(
4
)
1.8
0.0018
E12.5 retina
AACTCCCTCC
(
4
)
1.9
0.0019
E12.5 retina
AAGAAACTGA
(
5
)
1.9
0.0019
E12.5 retina
AGGAACAGAA
(
6
)
1.9
0.0019
E12.5 retina
GCTGTGAACT (
5
)
1.9
0.0019
E14.5 retina
TGTGTGTGCC (
5
)
5.5
0.0055
E14.5 retina
AACTCCCTCC
(
4
)
1.8
0.0018
E14.5 retina
GCTGTGAACT (
5
)
1.8
0.0018
E14.5 retina
GTGTGAACTA
(
4
)
1.8
0.0018
E16.5 retina
GTGTGAACTA
(
4
)
10.9
0.0109
E16.5 retina
AACTCCCTCC
(
4
)
5.4
0.0054
E16.5 retina
GCTGTGAACT (
5
)
5.4
0.0054
E16.5 retina
TCCTCTTGCA
(
2
)
3.6
0.0036
E18.5 retina
GTGTGAACTA
(
4
)
3.6
0.0036
E18.5 retina
AACTCCCTCC
(
4
)
1.8
0.0018
P0.5 retina
AACTCCCTCC
(
4
)
7.9
0.0079
P2.5 retina
AACTCCCTCC
(
4
)
1.8
0.0018
P2.5 retina
GTGTGAACTA
(
4
)
1.8
0.0018
P4.5 retina
AACTCCCTCC
(
4
)
9.9
0.0099
P4.5 retina
GTGTGAACTA
(
4
)
4
0.004
P6.5 retina
AACTCCCTCC
(
4
)
1.7
0.0017
P6.5 retina
GTGTGAACTA
(
4
)
1.7
0.0017
P10.5 crx- retina
AACTCCCTCC
(
4
)
3.7
0.0037
P10.5 crx- retina
GTGTGAACTA
(
4
)
3.7
0.0037
P10.5 crx+ retina
AACTCCCTCC
(
4
)
3.8
0.0038
P10.5 crx+ retina
TGTGTGTGCC (
5
)
3.8
0.0038
P10.5 crx+ retina
GCTTGTGAAC (
6
)
1.9
0.0019
P10.5 crx+ retina
GTGTGAACTA
(
4
)
1.9
0.0019
Adult retinal
AACTCCCTCC
(
4
)
7.4
0.0074
Adult retinal
TGTGTGTGCC (
5
)
1.9
0.0019
ONL
AACTCCCTCC
(
4
)
1.9
0.0019
ONL
AAGAAACTGA
(
5
)
1.9
0.0019
ONL
GCTTGTGAAC (
6
)
1.9
0.0019
ONL
TGTGTGTGCC (
5
)
1.9
0.0019
