Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.235738	2210008I11Rik	RIKEN cDNA 2210008I11 gene	4		76580
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	LOC142678[skeletrophin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAGGTCAGTG (4) 6.5 0.0065 P8 Cb GC TGGTTGCTGA (15) 3.3 0.0033 P8 Cb GC GGAGGGTGTG (4) 1.6 0.0016 Cb medulloblastoma GAGCGTGCGC 9.2 0.0092 Cb medulloblastoma GCCGCACTGG (3) 2.3 0.0023 Cb medulloblastoma GGAGCTTTTT (5) 2.3 0.0023 Cb medulloblastoma TGGTTGCTGA (15) 2.3 0.0023 P8 GC+1d culture GAGCGTGCGC 2.3 0.0023 P8 GC+1d culture GGAGCTTTTT (5) 1.1 0.0011 P8 GC+SHH+1d culture GGAGGGTGTG (4) 2.3 0.0023 P8 GC+SHH+1d culture TGGTTGCTGA (15) 2.3 0.0023 P8 GC+SHH+1d culture GCCGCACTGG (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGCAGGTGA (2) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGA (15) 7 0.007 E15 cortex GAGCGTGCGC 14.8 0.0148 E15 cortex TGGTTGCTGA (15) 4.9 0.0049 Hypothalamus GAGCGTGCGC 1.8 0.0018 Hypothalamus GCCGCACTGG (3) 1.8 0.0018 Hypothalamus TGGTTGCTGA (15) 1.8 0.0018 E12.5 retina TGGTTGCTGA (15) 1.9 0.0019 E14.5 retina TGGTTGCTGA (15) 21.9 0.0219 E14.5 retina GGAGGGTGTG (4) 3.6 0.0036 E14.5 retina GGGCAGGTGA (2) 1.8 0.0018 E16.5 retina TGGTTGCTGA (15) 19.9 0.0199 E16.5 retina GGAGGGTGTG (4) 10.9 0.0109 E16.5 retina GAGCGTGCGC 1.8 0.0018 E16.5 retina GCCGCACTGG (3) 1.8 0.0018 E18.5 retina GGAGGGTGTG (4) 7.3 0.0073 E18.5 retina GAGCGTGCGC 3.6 0.0036 E18.5 retina TGGTTGCTGA (15) 1.8 0.0018 P0.5 retina GAGCGTGCGC 3.9 0.0039 P0.5 retina GAGCGTGCCC (2) 2 0.002 P0.5 retina TGGTTGCTGA (15) 2 0.002 P2.5 retina GGAGGGTGTG (4) 3.5 0.0035 P2.5 retina TGGTTGCTGA (15) 1.8 0.0018 P4.5 retina GGAGGGTGTG (4) 7.9 0.0079 P4.5 retina TGGTTGCTGA (15) 5.9 0.0059 P4.5 retina GAGCGTGCGC 2 0.002 P6.5 retina GGAGGGTGTG (4) 8.3 0.0083 P6.5 retina TGGTTGCTGA (15) 8.3 0.0083 P6.5 retina CAAAAGGCCC (6) 1.7 0.0017 P6.5 retina GGGCAGGTGA (2) 1.7 0.0017 P10.5 crx- retina GAGCGTGCGC 7.4 0.0074 P10.5 crx- retina GGAGGGTGTG (4) 7.4 0.0074 P10.5 crx- retina TGGTTGCTGA (15) 1.9 0.0019 P10.5 crx+ retina GGAGGGTGTG (4) 50 0.05 P10.5 crx+ retina TGGTTGCTGA (15) 3.8 0.0038 P10.5 crx+ retina CAAAAGGCCC (6) 1.9 0.0019 P10.5 crx+ retina GAGCGTGCCC (2) 1.9 0.0019 P10.5 crx+ retina GAGCGTGCGC 1.9 0.0019 P10.5 crx+ retina GGAGCTTTTT (5) 1.9 0.0019 Adult retinal GGAGGGTGTG (4) 9.3 0.0093 Adult retinal GAGCGTGCGC 5.6 0.0056 Adult retinal CAAAAGGCCC (6) 1.9 0.0019 Adult retinal TGGTTGCTGA (15) 1.9 0.0019 ONL GGAGGGTGTG (4) 38.3 0.0383 ONL TGGTTGCTGA (15) 11.5 0.0115 ONL GAGCGTGCGC 1.9 0.0019