Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.235891	D4Ertd361e	DNA segment, Chr 4, ERATO Doi 361, expressed	4	4 56.5 cM	52308
Mm.235891	Prnpip1	prion protein interacting protein 1	4		140546
Gene Ontology	biological_process unknown | plasma membrane | protein binding
Human Homolog	PRNPIP[prion protein interacting protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGTGTGGTG (6) 17.9 0.0179 P8 Cb GC GCGACAGCCT (3) 3.3 0.0033 P8 Cb GC GGCCTTGCTG (11) 1.6 0.0016 Cb medulloblastoma GTGTGTGGTG (6) 13.9 0.0139 Cb medulloblastoma TTTGTATTAA (3) 2.3 0.0023 P8 GC+1d culture GTGTGTGGTG (6) 5.7 0.0057 P8 GC+1d culture TTTGTATTAA (3) 5.7 0.0057 P8 GC+1d culture GCGACAGCCT (3) 1.1 0.0011 P8 GC+1d culture GCTTGAATGA (2) 1.1 0.0011 P8 GC+SHH+1d culture GTGTGTGGTG (6) 19.9 0.0199 P8 GC+SHH+1d culture TTTGTATTAA (3) 4.7 0.0047 P8 GC+SHH+1d culture CCCTCACACA (7) 1.2 0.0012 3T3 fibroblasts GTGTGTGGTG (6) 21 0.021 3T3 fibroblasts CCCTCACACA (7) 3.5 0.0035 3T3 fibroblasts GCCACTTGGC (6) 3.5 0.0035 E15 cortex GTGTGTGGTG (6) 24.7 0.0247 P1 cortex GTGTGTGGTG (6) 9.1 0.0091 P1 cortex TTTGTATTAA (3) 4.5 0.0045 Hypothalamus GTGTGTGGTG (6) 7.2 0.0072 Hypothalamus GCTTGAATGA (2) 1.8 0.0018 Hypothalamus TTTGTATTAA (3) 1.8 0.0018 E12.5 retina GTTTCCAGGA (4) 20.7 0.0207 E12.5 retina GTGTGTGGTG (6) 11.3 0.0113 E12.5 retina GCCACTTGGC (6) 1.9 0.0019 E12.5 retina TTTGTATTAA (3) 1.9 0.0019 E14.5 retina GTGTGTGGTG (6) 9.1 0.0091 E14.5 retina TTTGTATTAA (3) 5.5 0.0055 E14.5 retina CACTATGGAT (6) 1.8 0.0018 E14.5 retina GCGACAGCCT (3) 1.8 0.0018 E16.5 retina GTGTGTGGTG (6) 7.2 0.0072 E16.5 retina TTTGTATTAA (3) 5.4 0.0054 E16.5 retina GTTTCCAGGA (4) 3.6 0.0036 E16.5 retina CCCTCACACA (7) 1.8 0.0018 E16.5 retina GCTTGAATGA (2) 1.8 0.0018 E18.5 retina TTTGTATTAA (3) 12.7 0.0127 E18.5 retina GTGTGTGGTG (6) 9.1 0.0091 E18.5 retina GCCACTTGGC (6) 1.8 0.0018 E18.5 retina GCGACAGCCT (3) 1.8 0.0018 E18.5 retina GCTTGAATGA (2) 1.8 0.0018 P0.5 retina GTTTCCAGGA (4) 123.6 0.1236 P0.5 retina GTGTGTGGTG (6) 9.8 0.0098 P0.5 retina TTTGTATTAA (3) 2 0.002 P2.5 retina GTGTGTGGTG (6) 15.8 0.0158 P2.5 retina GTTTCCAGGA (4) 1.8 0.0018 P2.5 retina TTTGTATTAA (3) 1.8 0.0018 P4.5 retina GTGTGTGGTG (6) 13.9 0.0139 P4.5 retina TTTGTATTAA (3) 7.9 0.0079 P4.5 retina CACTATGGAT (6) 4 0.004 P6.5 retina GTGTGTGGTG (6) 18.3 0.0183 P6.5 retina TTTGTATTAA (3) 3.3 0.0033 P6.5 retina GCCACTTGGC (6) 1.7 0.0017 P6.5 retina GCTTGAATGA (2) 1.7 0.0017 P6.5 retina GGCCTTGCTG (11) 1.7 0.0017 P6.5 retina GTTTCCAGGA (4) 1.7 0.0017 P10.5 crx- retina GTGTGTGGTG (6) 13 0.013 P10.5 crx- retina GCCACTTGGC (6) 1.9 0.0019 P10.5 crx- retina TTTGTATTAA (3) 1.9 0.0019 P10.5 crx+ retina GTGTGTGGTG (6) 28.8 0.0288 P10.5 crx+ retina TTTGTATTAA (3) 11.5 0.0115 Adult retinal GTGTGTGGTG (6) 11.1 0.0111 Adult retinal GCTTGAATGA (2) 3.7 0.0037 Adult retinal GGCCTTGCTG (11) 1.9 0.0019 Adult retinal TTTGTATTAA (3) 1.9 0.0019 ONL GTGTGTGGTG (6) 5.7 0.0057 ONL TTTGTATTAA (3) 3.8 0.0038