Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236004	Vps4a	vacuolar protein sorting 4a (yeast)	8		116733
Mm.236004	2610019N19Rik	RIKEN cDNA 2610019N19 gene	8		68023
Human Homolog	PDF[peptide deformylase-like protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 30 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGAGGAGTG (5) TAGGACACTT (2) 4.9 0.0049 Cb medulloblastoma GCAAGAAGCC (3) TAGGACACTT (2) 6.9 0.0069 P8 GC+1d culture GCAAGAAGCC (3) TAGGACACTT (2) 3.4 0.0034 P8 GC+SHH+1d culture GAGAGGAGTG (5) GCAAGAAGCC (3) TAGGACACTT (2) 5.8 0.0058 E15 cortex TAGGACACTT (2) 4.9 0.0049 P1 cortex GAGAGGAGTG (5) TAGGACACTT (2) 27.2 0.0272 Hypothalamus GAGAGGAGTG (5) 1.8 0.0018 E12.5 retina GAGAGGAGTG (5) TAGGACACTT (2) 7.5 0.0075 E14.5 retina TAGGACACTT (2) 3.6 0.0036 E16.5 retina GAGAGGAGTG (5) 3.6 0.0036 E18.5 retina GAGAGGAGTG (5) 1.8 0.0018 P0.5 retina GAGAGGAGTG (5) TAGGACACTT (2) 11.8 0.0118 P2.5 retina TAGGACACTT (2) 1.8 0.0018 P4.5 retina GAGAGGAGTG (5) 5.9 0.0059 P6.5 retina GAGAGGAGTG (5) TAGGACACTT (2) 10 0.01 P10.5 crx- retina GAGAGGAGTG (5) GCAAGAAGCC (3) 9.3 0.0093 P10.5 crx+ retina TAGGACACTT (2) 1.9 0.0019 Adult retinal GAGAGGAGTG (5) TAGGACACTT (2) 14.9 0.0149 ONL TAGGACACTT (2) 1.9 0.0019