Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236449	Rnf34	ring finger protein 34	5		80751
Human Homolog	RNF34[ring finger protein 34]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTCTCCCT (2) 8.2 0.0082 P8 Cb GC GTGGCGCACA (11) 8.2 0.0082 P8 Cb GC GACGAGATGG (9) 3.3 0.0033 P8 Cb GC TTTGTTGTGA (3) 3.3 0.0033 P8 Cb GC TTTTGTATAG (4) 1.6 0.0016 Cb medulloblastoma GACGAGATGG (9) 2.3 0.0023 Cb medulloblastoma TAATCAATTT (2) 2.3 0.0023 Cb medulloblastoma TTAATAAAAA (4) 2.3 0.0023 Cb medulloblastoma TTTTTAAGTC (3) 2.3 0.0023 P8 GC+1d culture TAATCAATTT (2) 5.7 0.0057 P8 GC+1d culture CAGGAAAAAC (4) 4.6 0.0046 P8 GC+1d culture GTGGCGCACA (11) 3.4 0.0034 P8 GC+1d culture ATGAAGATGA (6) 2.3 0.0023 P8 GC+1d culture TGTATTTTAA (5) 2.3 0.0023 P8 GC+1d culture TTTGTTGTGA (3) 2.3 0.0023 P8 GC+1d culture AGCTCTCCCT (2) 1.1 0.0011 P8 GC+1d culture TTAATAAAAA (4) 1.1 0.0011 P8 GC+1d culture TTAATAAAGA (10) 1.1 0.0011 P8 GC+SHH+1d culture TAATCAATTT (2) 4.7 0.0047 P8 GC+SHH+1d culture CAGGAAAAAC (4) 3.5 0.0035 P8 GC+SHH+1d culture GTGGCGCACA (11) 3.5 0.0035 P8 GC+SHH+1d culture AGAGGCAGTG 1.2 0.0012 P8 GC+SHH+1d culture ATGAAGATGA (6) 1.2 0.0012 3T3 fibroblasts GTGGCGCACA (11) 28 0.028 E15 cortex GTGGCGCACA (11) 44.5 0.0445 E15 cortex GACGAGATGG (9) 9.9 0.0099 E15 cortex AGCTCTCCCT (2) 4.9 0.0049 P1 cortex GTGGCGCACA (11) 4.5 0.0045 P1 cortex TGTATTTTAA (5) 4.5 0.0045 Hypothalamus GTGGCGCACA (11) 3.6 0.0036 Hypothalamus TTTGTTGTGA (3) 3.6 0.0036 Hypothalamus TAATCAATTT (2) 1.8 0.0018 Hypothalamus TTAATAAAGA (10) 1.8 0.0018 E12.5 retina TAATCAATTT (2) 5.6 0.0056 E12.5 retina TTTGTTGTGA (3) 5.6 0.0056 E12.5 retina GTGGCGCACA (11) 3.8 0.0038 E12.5 retina TTAATAAAAA (4) 1.9 0.0019 E12.5 retina TTTTTAAGTC (3) 1.9 0.0019 E14.5 retina GTGGCGCACA (11) 10.9 0.0109 E14.5 retina TAATCAATTT (2) 5.5 0.0055 E14.5 retina GACGAGATGG (9) 3.6 0.0036 E14.5 retina TTAATAAAAA (4) 1.8 0.0018 E14.5 retina TTAATAAAGA (10) 1.8 0.0018 E16.5 retina GTGGCGCACA (11) 9.1 0.0091 E16.5 retina GACGAGATGG (9) 7.2 0.0072 E16.5 retina ATGAAGATGA (6) 1.8 0.0018 E16.5 retina TTTGTTGTGA (3) 1.8 0.0018 E16.5 retina TTTTGTATAG (4) 1.8 0.0018 E18.5 retina GTGGCGCACA (11) 5.5 0.0055 E18.5 retina TTAATAAAAA (4) 5.5 0.0055 E18.5 retina GACGAGATGG (9) 3.6 0.0036 E18.5 retina TAATCAATTT (2) 3.6 0.0036 E18.5 retina TTAATAAAGA (10) 1.8 0.0018 P0.5 retina GTGGCGCACA (11) 5.9 0.0059 P0.5 retina AGAGGCAGTG 2 0.002 P0.5 retina TAATCAATTT (2) 2 0.002 P2.5 retina GTGGCGCACA (11) 7 0.007 P2.5 retina TAATCAATTT (2) 3.5 0.0035 P2.5 retina TTTTTAAGTC (3) 1.8 0.0018 P4.5 retina GTGGCGCACA (11) 7.9 0.0079 P4.5 retina TAATCAATTT (2) 5.9 0.0059 P4.5 retina CAGGAAAAAC (4) 2 0.002 P4.5 retina TTAATAAAAA (4) 2 0.002 P4.5 retina TTTTGTATAG (4) 2 0.002 P6.5 retina GTGGCGCACA (11) 11.7 0.0117 P6.5 retina ATGAAGATGA (6) 1.7 0.0017 P6.5 retina GACGAGATGG (9) 1.7 0.0017 P6.5 retina TTAATAAAAA (4) 1.7 0.0017 P6.5 retina TTAATAAAGA (10) 1.7 0.0017 P6.5 retina TTTGTTGTGA (3) 1.7 0.0017 P10.5 crx- retina GTGGCGCACA (11) 5.6 0.0056 P10.5 crx- retina TGTATTTTAA (5) 3.7 0.0037 P10.5 crx- retina TAATCAATTT (2) 1.9 0.0019 P10.5 crx- retina TTAATAAAGA (10) 1.9 0.0019 P10.5 crx+ retina GTGGCGCACA (11) 11.5 0.0115 P10.5 crx+ retina CAGGAAAAAC (4) 5.8 0.0058 P10.5 crx+ retina TAATCAATTT (2) 3.8 0.0038 P10.5 crx+ retina AGAGGCAGTG 1.9 0.0019 Adult retinal GTGGCGCACA (11) 22.2 0.0222 Adult retinal CAGGAAAAAC (4) 3.7 0.0037 Adult retinal TTAATAAAGA (10) 1.9 0.0019 ONL GTGGCGCACA (11) 13.4 0.0134 ONL CAGGAAAAAC (4) 3.8 0.0038 ONL TAATCAATTT (2) 1.9 0.0019 ONL TTAATAAAGA (10) 1.9 0.0019