Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.236513	Pcbp2	poly(rC) binding protein 2	15	15 61.7 cM	18521
Gene Ontology	DNA binding | nucleic acid binding | nucleus | ribonucleoprotein complex | RNA binding | RNA processing
Human Homolog	PCBP2[poly(rC) binding protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 82 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAAGGAAGT GAAATGTAAG (3) GAATTTTTTT 76.6 0.0766 Cb medulloblastoma AACTCACCAT (2) ATTTTTTAAT (2) CTGTTAGTCG (3) GAAAGGAAGT GAAATGTAAG (3) GAATTTTTTT 60 0.06 P8 GC+1d culture ATTTTTTAAT (2) CCACCTGTCT (2) GAAATGTAAG (3) GGTGGTGAAC (3) 45.5 0.0455 P8 GC+SHH+1d culture CCACCTGTCT (2) GAAATGTAAG (3) GAATTTTTTT 76.2 0.0762 3T3 fibroblasts GAAATGTAAG (3) 7 0.007 E15 cortex GAAATGTAAG (3) GAATTTTTTT GCAACACCGG GGGAGCAGCT 24.6 0.0246 P1 cortex AGAAGTAGTT GAAATGTAAG (3) 31.8 0.0318 Hypothalamus ACAAACAAAA (3) AGTGGATGAT (3) GAAATGTAAG (3) GGGAGCAGCT 34.4 0.0344 E12.5 retina AGTGGATGAT (3) CCACCTGTCT (2) GAAATGTAAG (3) TTGGAGACTC (2) 103.3 0.1033 E14.5 retina AACTCACCAT (2) AGTGGATGAT (3) ATCCATCTGT CCACCTGTCT (2) CTGTTAGTCG (3) GAAAGGAAGT GAAATGTAAG (3) GGTGGTGAAC (3) 116.5 0.1165 E16.5 retina AACTCACCAT (2) AACTCTTGGC ATCCATCTGT CTGTTAGTCG (3) GAAATGTAAG (3) GCAACACCGG GGGAGCAGCT GGTGGTGAAC (3) 130.3 0.1303 E18.5 retina ACAAACAAAA (3) AGTGGATGAT (3) ATCCATCTGT GAAATGTAAG (3) 70.9 0.0709 P0.5 retina AACTCTTGGC CTGTTAGTCG (3) GAAAGGAAGT GAAATGTAAG (3) GAATTTTTTT 64.9 0.0649 P2.5 retina AACTCTTGGC ATTTTTTAAT (2) GAAATGTAAG (3) 88.1 0.0881 P4.5 retina ATCCATCTGT GAAATGTAAG (3) GGTGGTGAAC (3) 130.8 0.1308 P6.5 retina ACAAACAAAA (3) AGTGGATGAT (3) ATTTTTTAAT (2) GAAATGTAAG (3) 150.2 0.1502 P10.5 crx- retina CCACCTGTCT (2) GAAATGTAAG (3) GCAACACCGG GGGAGCAGCT 139.5 0.1395 P10.5 crx+ retina AGAAGTAGTT CTGTTAGTCG (3) GAAATGTAAG (3) 105.7 0.1057 Adult retinal AACTCTTGGC ACAAACAAAA (3) GAAAGGAAGT GAAATGTAAG (3) GAATTTTTTT 68.6 0.0686 ONL AACTCTTGGC AGAAGTAGTT CTGTTAGTCG (3) GAAATGTAAG (3) 114.8 0.1148